Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RFPL1S-203ENST00000539579 330 ntBASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 AC122134.1-201ENST00000565664 1104 ntBASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KIAA1549Q9HCM3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 SNORD17-201ENST00000390930 237 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 RPS29P31-201ENST00000446147 164 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 Z75741.1-201ENST00000446793 314 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC026784.1-201ENST00000507986 352 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC083899.2-201ENST00000423285 1376 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC073063.1-201ENST00000434352 607 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC009263.1-201ENST00000441193 1239 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC026427.2-201ENST00000506228 536 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 MIR3944-201ENST00000581277 108 ntBASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KIAA1549Q9HCM3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 OR11H5P-202ENST00000641612 1325 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AL445437.1-201ENST00000623157 3087 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 CR381670.1-201ENST00000624291 1693 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 MIR218-2-201ENST00000385006 110 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 LAP3P1-201ENST00000403648 294 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 HIGD1AP12-201ENST00000427832 281 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 RPL21P110-201ENST00000433345 446 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 CYCSP35-201ENST00000451978 304 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC084357.1-201ENST00000473404 255 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC093663.1-201ENST00000497190 394 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AL358832.1-201ENST00000497800 389 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC069209.1-201ENST00000619282 651 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AP002967.1-201ENST00000624203 539 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC127502.3-201ENST00000636170 1206 ntBASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KIAA1549Q9HCM3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC007685.1-201ENST00000329806 452 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 RNA5SP267-201ENST00000364893 126 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AL136116.1-201ENST00000403591 381 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AL512430.2-201ENST00000406786 339 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms