Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL645927.1-201ENST00000396783 406 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 Z98745.1-201ENST00000402553 494 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 RN7SKP100-201ENST00000411258 284 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 RSU1P3-201ENST00000412878 835 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 BX510359.2-201ENST00000417920 305 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 BOLA3P4-201ENST00000418151 400 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 RBMY2KP-201ENST00000418221 992 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC092634.6-201ENST00000418558 192 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 RPL31P45-201ENST00000419532 356 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 MTCO3P1-205ENST00000422088 832 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 OR2B7P-201ENST00000429302 934 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 PSMA2P3-201ENST00000429685 675 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 TPTE2P3-201ENST00000441562 1189 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 MTCO2P25-201ENST00000447065 681 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC087385.1-201ENST00000475062 312 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC004453.1-201ENST00000487895 408 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC114322.1-201ENST00000506771 926 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 RN7SKP277-201ENST00000516895 283 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 CYCSP28-201ENST00000534284 321 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AGGF1P8-201ENST00000562979 1000 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC009097.3-201ENST00000563557 1018 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC022662.1-201ENST00000580252 331 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 MIR4646-201ENST00000580775 63 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 GAS5-AS1-201ENST00000602767 694 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 MRPS35P3-201ENST00000603189 709 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC025588.2-201ENST00000604851 466 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC005084.1-201ENST00000605160 304 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC004948.1-201ENST00000609858 672 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AP000894.4-201ENST00000610185 483 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC009464.1-201ENST00000615731 469 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC087385.3-201ENST00000620477 187 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 AC018445.2-201ENST00000622987 260 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 MIR6715B-201ENST00000637172 77 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.47□□□□□ -1.69
BRF2Q9HAW0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRF2Q9HAW0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.46□□□□□ -1.69
BRF2Q9HAW0 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
BRF2Q9HAW0 EOGT-210ENST00000615922 1931 ntBASIC4.46□□□□□ -1.69
BRF2Q9HAW0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
BRF2Q9HAW0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 SNORA74A-201ENST00000364089 198 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 ENSAP1-201ENST00000392855 326 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AL109941.1-201ENST00000401925 229 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 RPL23AP47-201ENST00000408017 460 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 MIR1250-201ENST00000408098 113 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AL133384.1-201ENST00000412744 351 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 RPS24P7-201ENST00000416921 246 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC140479.3-201ENST00000418944 1126 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 MTCO2P21-201ENST00000419780 677 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC016831.4-201ENST00000438302 307 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 ARL4AP3-201ENST00000441452 574 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 RPL23AP76-201ENST00000441860 458 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms