Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TMEM38AQ9H6F2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
TMEM38AQ9H6F2 CEP170P1-201ENST00000502249 4587 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 MTND4P31-201ENST00000425607 1343 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 RNU1-32P-201ENST00000363937 159 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AL356095.1-201ENST00000417217 199 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 MTND2P15-201ENST00000418575 892 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 Z74696.2-201ENST00000436514 498 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC006480.1-201ENST00000449887 378 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 PPIAP15-201ENST00000479662 484 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC110792.1-201ENST00000491826 472 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 RAC1P2-201ENST00000511164 579 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 SNORA70.14-201ENST00000516205 110 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 RNA5SP164-201ENST00000516533 110 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC009101.1-201ENST00000568135 242 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC099489.2-201ENST00000574976 260 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 MIR4284-201ENST00000578924 81 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 AC115621.1-201ENST00000604653 858 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 MIR6820-201ENST00000611508 62 ntBASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM38AQ9H6F2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 SNORD6-201ENST00000365444 73 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AC083799.1-201ENST00000366451 910 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 RNU4-6P-201ENST00000410804 122 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AL691447.1-201ENST00000419456 387 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 MOB1AP1-201ENST00000430903 535 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 MTND2P21-201ENST00000436242 1042 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 ELOCP11-201ENST00000436690 332 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 ELOCP16-201ENST00000444494 332 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 RNU6-775P-201ENST00000459318 96 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 HMGB1P21-201ENST00000502313 581 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 OR5H4P-201ENST00000510851 923 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 RNA5SP309-201ENST00000516670 106 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 IGKV2-36-201ENST00000519999 223 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 MRPL49P2-201ENST00000521066 465 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AC008489.1-201ENST00000524271 483 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AL121594.4-201ENST00000556211 1196 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AC067805.1-201ENST00000559344 470 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 PCNAP1-202ENST00000595299 752 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 U6.48-201ENST00000618523 106 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 AC024023.1-201ENST00000624530 922 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 MIR492-201ENST00000638676 116 ntBASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.55□□□□□ -1.84
TMEM38AQ9H6F2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
TMEM38AQ9H6F2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM38AQ9H6F2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM38AQ9H6F2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM38AQ9H6F2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM38AQ9H6F2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms