Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC28BQ9BUN5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC28BQ9BUN5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.77
CCDC28BQ9BUN5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC010385.1-201ENST00000412374 256 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 LINC01347-201ENST00000417964 355 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 CHIAP3-201ENST00000423668 1133 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AL627308.1-201ENST00000435693 821 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 CACYBPP1-201ENST00000438592 684 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 SNRPGP5-201ENST00000456003 220 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 RN7SL98P-201ENST00000462271 300 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC004801.2-202ENST00000463559 283 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 METTL15P1-201ENST00000481421 1045 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 VN1R84P-201ENST00000593697 235 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC114878.2-201ENST00000604863 1251 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC090912.3-201ENST00000609775 533 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC124016.2-201ENST00000610058 665 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 RNU6-1192P-201ENST00000612197 107 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AL592295.2-201ENST00000612578 206 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC009318.3-201ENST00000616916 503 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 RNU6-489P-201ENST00000618289 107 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 MIR6886-201ENST00000619864 61 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 AC145207.9-201ENST00000623802 325 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 CASC19-284ENST00000642142 1868 ntBASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28BQ9BUN5 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 CR381670.1-201ENST00000624291 1693 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 ASNSP1-204ENST00000641977 1664 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC131971.1-201ENST00000332881 1482 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC066616.2-201ENST00000559334 1481 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 METTL21EP-201ENST00000298105 713 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC234772.1-201ENST00000377927 937 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RNU6-207P-201ENST00000384137 107 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RNU6-185P-201ENST00000384421 107 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RNU6-1005P-201ENST00000384519 107 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 MIR122-201ENST00000385044 85 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 ATP5F1P4-201ENST00000397288 746 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 SPTLC1P2-201ENST00000407089 121 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 MTND4P11-201ENST00000417020 1058 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 SFR1P2-201ENST00000421841 730 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC241520.1-201ENST00000422654 1099 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RPEP3-201ENST00000425462 676 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 ETF1P3-201ENST00000430422 1160 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC011242.1-201ENST00000433596 1158 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC083863.1-201ENST00000438811 231 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AL645638.1-201ENST00000440519 361 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC097499.1-201ENST00000444277 208 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RN7SL629P-201ENST00000489622 285 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RN7SL691P-201ENST00000494487 301 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC026726.1-201ENST00000512859 601 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RNA5SP519-201ENST00000516480 119 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC105233.3-201ENST00000531125 744 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 OR5D15P-201ENST00000531671 942 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AP003717.3-201ENST00000544832 1180 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC068714.1-201ENST00000559623 800 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC022655.2-201ENST00000577280 318 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms