Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC020978.6-201ENST00000571197 3177 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 ZNF72P-201ENST00000425869 1908 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AL136984.1-201ENST00000607611 1893 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 Y_RNA.19-201ENST00000362462 99 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 RNU1-122P-201ENST00000365538 156 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 ARMCX7P-201ENST00000372828 562 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 RNU6-842P-201ENST00000384269 107 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 MIR575-201ENST00000385013 94 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC069218.2-201ENST00000411665 344 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 RPL34P19-201ENST00000415903 342 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC234779.1-201ENST00000425910 285 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 RHOT1P3-201ENST00000436571 331 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 CHEK2P4-201ENST00000450340 246 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 PTMAP1-205ENST00000455552 325 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC008620.1-201ENST00000468453 592 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 RPL23AP64-201ENST00000469465 435 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC008040.4-201ENST00000494834 768 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC007991.1-201ENST00000522680 631 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 OR4C1P-201ENST00000530880 937 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC084783.1-201ENST00000565846 910 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 MIR4293-201ENST00000584305 78 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC006116.6-201ENST00000593258 1103 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC009779.6-201ENST00000603972 165 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 RAC1P9-201ENST00000604990 392 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 RN7SL778P-201ENST00000607160 297 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 uc_338.37-201ENST00000620113 186 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 GABPAP-201ENST00000419271 1356 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC090132.1-201ENST00000524071 1480 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC126773.4-201ENST00000612545 3043 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 EXOC5P1-201ENST00000510543 1969 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.51□□□□□ -1.37
USB1Q9BQ65 AC008669.1-201ENST00000565823 2178 ntBASIC6.51□□□□□ -1.37
USB1Q9BQ65 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
USB1Q9BQ65 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC034229.2-201ENST00000566945 2508 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC011933.2-201ENST00000578539 2790 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 LPAL2-203ENST00000454031 2498 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.5□□□□□ -1.37
USB1Q9BQ65 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
USB1Q9BQ65 AC104966.1-201ENST00000467010 1464 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 Y_RNA.20-201ENST00000362479 113 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 SNORD82-201ENST00000365530 70 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 RNU6-214P-201ENST00000384130 107 ntBASIC6.5□□□□□ -1.37
USB1Q9BQ65 RNU6-187P-201ENST00000384139 106 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms