Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RNA5SP80-201ENST00000410475 111 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC098592.1-201ENST00000419352 333 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC007435.1-201ENST00000421086 415 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AL355433.1-201ENST00000422804 300 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 MTCO1P3-201ENST00000429327 192 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC093414.1-201ENST00000434712 514 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC096638.2-201ENST00000434965 711 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 USP9YP28-201ENST00000435142 589 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 ELOCP8-201ENST00000439309 332 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 ELOCP15-201ENST00000442090 332 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 RPL31P44-201ENST00000447680 377 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 MTCO3P16-201ENST00000454456 754 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 MTCO2P18-201ENST00000457151 658 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 BZW1P2-201ENST00000473537 826 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AL035404.1-201ENST00000497982 568 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC006499.3-201ENST00000506077 748 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC116353.3-201ENST00000511215 249 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 RNA5SP34-201ENST00000516887 130 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC105185.1-201ENST00000518705 535 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.55□□□□□ -1.84
VGLL1Q99990 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC133555.2-201ENST00000550213 292 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC022069.1-201ENST00000582910 658 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 BNIP3P26-201ENST00000600827 554 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC090525.3-201ENST00000605601 189 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC069545.1-201ENST00000605671 358 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC007497.1-201ENST00000610421 561 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AC013562.2-201ENST00000611632 603 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC145207.9-201ENST00000623802 325 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 AF001550.2-201ENST00000636643 217 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 AC011266.1-201ENST00000624119 3569 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.55□□□□□ -1.84
VGLL1Q99990 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.55□□□□□ -1.84
VGLL1Q99990 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VGLL1Q99990 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
VGLL1Q99990 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
VGLL1Q99990 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VGLL1Q99990 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.54□□□□□ -1.84
VGLL1Q99990 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VGLL1Q99990 MTND4P5-201ENST00000435821 1374 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
VGLL1Q99990 AL355852.1-201ENST00000454081 1771 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.54□□□□□ -1.84
VGLL1Q99990 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VGLL1Q99990 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VGLL1Q99990 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VGLL1Q99990 RNA5SP513-201ENST00000364648 118 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 RNU6-619P-201ENST00000365146 108 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.54□□□□□ -1.84
VGLL1Q99990 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VGLL1Q99990 Y_RNA.505-201ENST00000384489 102 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 RNU1-82P-201ENST00000390851 165 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 SNORD65.1-201ENST00000390889 71 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 AL590084.2-201ENST00000401481 382 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 AL136131.1-201ENST00000406079 803 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 AL512430.2-201ENST00000406786 339 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.54□□□□□ -1.84
VGLL1Q99990 RAC1P3-201ENST00000416129 580 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 TIMM9P2-201ENST00000419324 266 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 Z74021.1-201ENST00000423610 407 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 AL645608.4-201ENST00000423619 154 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.54□□□□□ -1.84
VGLL1Q99990 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.54□□□□□ -1.84
VGLL1Q99990 AC234781.2-201ENST00000426370 994 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 AC005033.1-201ENST00000428904 813 ntBASIC3.54□□□□□ -1.84
VGLL1Q99990 SKP1P3-201ENST00000429280 487 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms