Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.32□□□□□ -1.56
HPS3Q969F9 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.32□□□□□ -1.56
HPS3Q969F9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AC103881.1-201ENST00000603476 538 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AL121932.1-201ENST00000605542 214 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AC080013.6-201ENST00000606185 215 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AP001521.2-201ENST00000608772 546 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AL392048.1-201ENST00000613946 534 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AC122133.1-201ENST00000613964 233 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.32□□□□□ -1.56
HPS3Q969F9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.32□□□□□ -1.56
HPS3Q969F9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
HPS3Q969F9 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HPS3Q969F9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HPS3Q969F9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HPS3Q969F9 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HPS3Q969F9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.31□□□□□ -1.56
HPS3Q969F9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 RNU1-82P-201ENST00000390851 165 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AC136624.1-201ENST00000400791 413 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 RPL31P52-201ENST00000407532 367 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 U3.35-201ENST00000408405 208 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 LUZP4P1-201ENST00000415420 344 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AC092634.6-201ENST00000418558 192 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AL353597.2-202ENST00000434901 373 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AC004938.1-201ENST00000438468 308 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AL591503.2-201ENST00000442314 1005 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 H2AFZP6-201ENST00000444403 394 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.31□□□□□ -1.56
HPS3Q969F9 TDGF1P1-201ENST00000445734 527 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS3Q969F9 NIP7P2-201ENST00000485801 544 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 IGLV2-34-201ENST00000490007 283 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 KLRA1P-201ENST00000503499 986 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AC091868.1-201ENST00000508746 304 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS3Q969F9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.31□□□□□ -1.56
HPS3Q969F9 TRAV15-201ENST00000556680 249 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AC090515.3-201ENST00000560431 315 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AC018552.3-201ENST00000567416 561 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AC074051.3-201ENST00000570238 358 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AC022726.1-201ENST00000587475 207 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AL163642.2-201ENST00000604722 1019 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AL354976.1-201ENST00000613843 387 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.31□□□□□ -1.56
HPS3Q969F9 AP001784.1-201ENST00000624107 428 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HPS3Q969F9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.31□□□□□ -1.56
HPS3Q969F9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 AC093535.2-201ENST00000624769 2326 ntBASIC5.31□□□□□ -1.56
HPS3Q969F9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.31□□□□□ -1.56
HPS3Q969F9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS3Q969F9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.3□□□□□ -1.56
HPS3Q969F9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HPS3Q969F9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AP000526.1-201ENST00000603308 1388 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.3□□□□□ -1.56
HPS3Q969F9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
HPS3Q969F9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.3□□□□□ -1.56
HPS3Q969F9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HPS3Q969F9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS3Q969F9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS3Q969F9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS3Q969F9 RNU6-1200P-201ENST00000384162 107 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 FABP12P1-201ENST00000401911 322 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AL592291.1-201ENST00000403830 352 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 MIR1302-8-201ENST00000408342 128 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 RBMY2KP-201ENST00000418221 992 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 TIMM9P2-201ENST00000419324 266 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 RPL36AP10-201ENST00000421785 322 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 RPL7P57-201ENST00000423238 740 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AL022400.1-201ENST00000423946 935 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 IPMKP1-201ENST00000425988 855 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 RPP40P1-201ENST00000426762 456 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS3Q969F9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AC008072.1-201ENST00000434254 824 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 B3GNT2P1-201ENST00000434960 952 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AC006466.1-201ENST00000438721 289 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms