Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.65□□□□□ -1.51
ERCC4Q92889 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ERCC4Q92889 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 RNU6-1215P-201ENST00000384441 102 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 RNU6-225P-201ENST00000384613 103 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 RNU6-1300P-201ENST00000391046 108 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC068533.2-201ENST00000411872 306 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 RPS15AP38-201ENST00000413110 372 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.64□□□□□ -1.51
ERCC4Q92889 CYCSP46-201ENST00000423569 204 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 AC108075.1-201ENST00000424692 529 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC4Q92889 CFL1P1-202ENST00000432948 411 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC4Q92889 RN7SL214P-201ENST00000487317 265 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 RN7SL629P-201ENST00000489622 285 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 AC010350.1-201ENST00000504908 231 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC4Q92889 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC010285.3-201ENST00000511668 676 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 OR6C7P-201ENST00000547875 934 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 AC090312.2-201ENST00000582687 378 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC055764.2-201ENST00000610089 670 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC016717.3-201ENST00000624730 554 ntBASIC5.64□□□□□ -1.51
ERCC4Q92889 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ERCC4Q92889 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
ERCC4Q92889 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
ERCC4Q92889 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.64□□□□□ -1.51
ERCC4Q92889 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.64□□□□□ -1.51
ERCC4Q92889 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC4Q92889 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC4Q92889 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC4Q92889 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.63□□□□□ -1.51
ERCC4Q92889 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC4Q92889 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC4Q92889 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ERCC4Q92889 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC4Q92889 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC4Q92889 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC4Q92889 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ERCC4Q92889 RNA5SP183-201ENST00000362452 119 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 Y_RNA.18-201ENST00000362461 102 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 CYCSP45-201ENST00000402289 315 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 DUTP5-201ENST00000406790 469 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 RN7SKP114-201ENST00000410327 279 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 RNU2-42P-201ENST00000410697 113 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AC093655.2-201ENST00000425735 631 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.63□□□□□ -1.51
ERCC4Q92889 RPL31P54-201ENST00000429803 370 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 NMNAT1P2-201ENST00000435192 860 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 RPS7P5-201ENST00000441482 581 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC4Q92889 TCEA1P1-201ENST00000449716 880 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AC092647.2-201ENST00000452998 253 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AC011225.1-201ENST00000457751 369 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 AC104763.1-201ENST00000475274 360 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 RN7SL799P-201ENST00000475891 298 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 OR2AO1P-201ENST00000476497 403 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 AC072039.1-201ENST00000477611 581 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 AC116337.2-201ENST00000477662 156 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 AC015724.1-201ENST00000478577 156 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 RPS27P23-201ENST00000487608 251 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 RPS4XP14-201ENST00000493072 781 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 AC104685.1-201ENST00000502445 371 ntBASIC5.63□□□□□ -1.51
ERCC4Q92889 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC4Q92889 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC4Q92889 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC4Q92889 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.63□□□□□ -1.51
ERCC4Q92889 AC022884.3-201ENST00000579571 248 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms