Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 AP002001.2-201ENST00000529025 1469 ntBASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.21□□□□□ -1.9
RTN4IP1Q8WWV3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 RNU6-31P-201ENST00000384388 108 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC005229.2-201ENST00000456995 399 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC090543.1-201ENST00000492168 485 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 USP9YP5-201ENST00000511770 630 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 SNORA70.14-201ENST00000516205 110 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 RNU6-1308P-201ENST00000516817 103 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 RNU6-889P-201ENST00000517189 103 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 RNA5SP179-201ENST00000517284 121 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC008802.1-201ENST00000519121 791 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AL121576.1-201ENST00000556055 276 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 MIR4458-201ENST00000578872 75 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 MIR4512-201ENST00000583257 77 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC119501.1-201ENST00000603646 475 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC091167.4-201ENST00000605079 184 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AC100814.1-201ENST00000606963 623 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AL355802.4-201ENST00000607635 548 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 AL118508.4-201ENST00000624142 1176 ntBASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RTN4IP1Q8WWV3 DDX6P1-205ENST00000441966 1436 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AL391417.1-201ENST00000404100 426 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 RPL26P37-201ENST00000411983 438 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 RPL30P2-201ENST00000414021 291 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 RSL24D1P6-201ENST00000426934 401 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 TBCAP1-201ENST00000436520 327 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC245517.2-201ENST00000442890 346 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 RPL21P11-201ENST00000461458 483 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 RN7SL385P-201ENST00000468873 276 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 OR52A4P-202ENST00000481634 799 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 MTCO1P31-201ENST00000506355 492 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 MTCO1P35-201ENST00000515270 228 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC016550.3-201ENST00000515706 767 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 PARP1P2-201ENST00000556806 195 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 Z82195.1-201ENST00000604558 398 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AL137849.1-201ENST00000604767 169 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC016957.2-201ENST00000616998 848 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC022893.2-201ENST00000564832 3296 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 AC017002.4-201ENST00000604721 1525 ntBASIC3.19□□□□□ -1.9
RTN4IP1Q8WWV3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms