Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 RFPL1S-203ENST00000539579 330 ntBASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AP003717.3-201ENST00000544832 1180 ntBASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC068714.1-201ENST00000559623 800 ntBASIC3.95□□□□□ -1.78
CCDC71Q8IV32 HNRNPCP4-201ENST00000571636 900 ntBASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC012254.4-201ENST00000588843 273 ntBASIC3.95□□□□□ -1.78
CCDC71Q8IV32 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC113403.1-201ENST00000604910 193 ntBASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AL591034.3-201ENST00000605511 685 ntBASIC3.95□□□□□ -1.78
CCDC71Q8IV32 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 FRG1HP-204ENST00000617940 757 ntBASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC71Q8IV32 AL451142.2-201ENST00000429076 2090 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RNU6-304P-201ENST00000364855 107 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RNU1-64P-201ENST00000365443 163 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 MIR134-201ENST00000385258 73 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC097374.1-203ENST00000400783 485 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RNA5SP317-201ENST00000410176 116 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RNA5SP311-201ENST00000411290 116 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC099336.2-201ENST00000422457 254 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC013262.1-201ENST00000426710 252 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 MED6P1-201ENST00000439659 713 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC114495.1-201ENST00000441274 436 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC044797.1-201ENST00000445744 679 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC005229.2-201ENST00000456995 399 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC099560.2-201ENST00000457554 255 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RNU6-1218P-201ENST00000458990 108 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RPS17P11-201ENST00000474297 293 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC005912.1-201ENST00000495392 255 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC108475.1-201ENST00000507880 950 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 SLC25A15P5-201ENST00000508033 253 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RNA5SP315-201ENST00000516340 116 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 RNA5SP312-201ENST00000517068 116 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 CBX3P5-201ENST00000552017 521 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 POLR2KP1-201ENST00000553226 168 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC027104.1-201ENST00000563702 681 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC007599.1-201ENST00000568688 1174 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC122134.1-202ENST00000569111 1201 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 OR6R2P-201ENST00000609216 300 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC016957.2-201ENST00000616998 848 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC139769.3-201ENST00000618383 175 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 AC022306.3-201ENST00000619930 550 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 FP325313.1-201ENST00000638228 703 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 EIF2AP4-201ENST00000424793 1781 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 MTND4P9-201ENST00000507819 1346 ntBASIC3.94□□□□□ -1.78
CCDC71Q8IV32 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71Q8IV32 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71Q8IV32 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71Q8IV32 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CCDC71Q8IV32 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC71Q8IV32 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71Q8IV32 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC71Q8IV32 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71Q8IV32 RNU6-468P-201ENST00000384003 109 ntBASIC3.93□□□□□ -1.78
CCDC71Q8IV32 AL022722.2-201ENST00000402519 180 ntBASIC3.93□□□□□ -1.78
CCDC71Q8IV32 AL391219.1-201ENST00000422570 483 ntBASIC3.93□□□□□ -1.78
CCDC71Q8IV32 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.93□□□□□ -1.78
CCDC71Q8IV32 RPL12P46-201ENST00000436610 195 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms