Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF43Q68DV7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF43Q68DV7 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 DDX18P6-201ENST00000450119 1997 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF43Q68DV7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 Y_RNA.157-201ENST00000363638 102 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 Y_RNA.315-201ENST00000365117 102 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 Y_RNA.474-201ENST00000384341 102 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 RNU6-1105P-201ENST00000384774 107 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 AL356057.3-201ENST00000402607 340 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 AC092745.2-202ENST00000411880 369 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 RPL35AP12-201ENST00000425362 338 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 RPS27AP6-201ENST00000427962 448 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 OR2B7P-201ENST00000429302 934 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 BMS1P19-201ENST00000433925 393 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 AC099670.2-201ENST00000435130 321 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 RPS12P17-201ENST00000438591 377 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 CBWD4P-201ENST00000445695 655 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 AL162739.1-201ENST00000450606 307 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 BTF3P13-201ENST00000513224 490 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 ZNF705CP-201ENST00000530515 889 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 AC009962.1-201ENST00000567327 3813 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF43Q68DV7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 SNRPGP17-201ENST00000603780 214 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 AC004853.1-201ENST00000604902 698 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 AC118658.2-201ENST00000618697 459 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 AL691477.1-201ENST00000624398 162 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 U6.107-201ENST00000637108 79 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 AC100810.6-201ENST00000638068 285 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF43Q68DV7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF43Q68DV7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF43Q68DV7 RLIMP2-201ENST00000427891 1563 ntBASIC6.1□□□□□ -1.43
RNF43Q68DV7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF43Q68DV7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF43Q68DV7 AP000473.2-201ENST00000602659 1537 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC100871.1-201ENST00000507871 1456 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AP002907.1-201ENST00000606361 1430 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC107982.1-201ENST00000507171 1300 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AL137058.3-201ENST00000624531 3099 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC011155.1-201ENST00000316512 456 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 U8.3-201ENST00000363321 132 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 U3.7-201ENST00000363668 216 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 RNA5SP132-201ENST00000364725 118 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 Y_RNA.579-201ENST00000390939 94 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AL589647.1-201ENST00000402485 466 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 SPTLC1P2-201ENST00000407089 121 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 RNU2-62P-201ENST00000410868 191 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 RN7SKP140-201ENST00000411196 284 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 RPS4XP5-201ENST00000419038 768 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC093155.2-201ENST00000420734 937 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 NME1P1-201ENST00000420914 382 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 RAD23BP1-201ENST00000421404 1227 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 RPL34P3-201ENST00000421454 338 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC099677.3-201ENST00000427081 395 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 VTI1BP4-201ENST00000427516 527 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 SUMO2P3-201ENST00000438311 288 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 GAPDHP58-201ENST00000438477 1006 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AL353093.1-201ENST00000441292 436 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 DHFRP3-201ENST00000455595 559 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 RN7SL352P-201ENST00000466002 277 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC099521.1-201ENST00000482557 334 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 RPL36AP51-201ENST00000487216 318 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms