Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF220Q5VTB9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF220Q5VTB9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RNF220Q5VTB9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF220Q5VTB9 AC023421.1-201ENST00000590535 1785 ntBASIC4.9□□□□□ -1.63
RNF220Q5VTB9 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.9□□□□□ -1.63
RNF220Q5VTB9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF220Q5VTB9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF220Q5VTB9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF220Q5VTB9 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RNF220Q5VTB9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RNF220Q5VTB9 CR381670.1-201ENST00000624291 1693 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC008079.2-201ENST00000623543 20396 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 RNA5SP28-201ENST00000363841 119 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 SNORD96B-201ENST00000386148 79 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AL133388.1-201ENST00000404509 287 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC013429.2-201ENST00000418798 781 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC083875.1-201ENST00000419509 405 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 Z99497.1-201ENST00000421282 135 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 UBE2FP3-201ENST00000436366 524 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 TMX2P1-201ENST00000436507 708 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AL390119.1-201ENST00000440329 312 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 RPL7AP61-201ENST00000443410 636 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 ARPC3P2-201ENST00000457786 533 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AL136126.1-201ENST00000473603 402 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC090013.1-201ENST00000485147 480 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC108941.1-201ENST00000502853 530 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC117532.1-201ENST00000514638 323 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 RNU6-150P-201ENST00000516237 95 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 HMGB1P40-201ENST00000525121 540 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC084824.1-201ENST00000550917 1005 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AF131215.7-201ENST00000602443 707 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 WISP1-OT1-201ENST00000602893 642 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AL513477.2-201ENST00000607858 568 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AC127024.6-201ENST00000621598 424 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AL691477.1-201ENST00000624398 162 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 MIR4496-201ENST00000635896 61 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF220Q5VTB9 AP002907.1-201ENST00000606361 1430 ntBASIC4.89□□□□□ -1.63
RNF220Q5VTB9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC068254.2-201ENST00000623938 3577 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 RNA5SP335-201ENST00000363817 110 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 RNU1-130P-201ENST00000363930 160 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 RN7SKP124-201ENST00000364730 341 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 MIR589-201ENST00000385238 99 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 FABP7P1-201ENST00000424004 391 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AL137845.2-201ENST00000444292 988 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 NOP56P2-201ENST00000447491 769 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 RPL31P15-201ENST00000449770 338 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 IGHV5-78-201ENST00000450948 295 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC073387.1-201ENST00000453261 709 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 RPL37P6-202ENST00000464216 403 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 FAM172BP-201ENST00000487497 1089 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms