Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.61□□□□□ -1.83
RFX4Q33E94 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFX4Q33E94 AC008083.2-201ENST00000546707 476 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.61□□□□□ -1.83
RFX4Q33E94 CYP2C60P-201ENST00000566088 139 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 MIR4277-201ENST00000578298 84 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.61□□□□□ -1.83
RFX4Q33E94 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RFX4Q33E94 AL592295.2-201ENST00000612578 206 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 AL391261.4-201ENST00000616012 481 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 MIR3653-201ENST00000625572 110 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.61□□□□□ -1.83
RFX4Q33E94 OR6C71P-202ENST00000641886 1107 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RFX4Q33E94 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
RFX4Q33E94 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX4Q33E94 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RFX4Q33E94 AC138393.1-206ENST00000540997 1886 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 RNU6-666P-201ENST00000363499 107 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFX4Q33E94 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFX4Q33E94 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX4Q33E94 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RFX4Q33E94 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX4Q33E94 AL357078.2-201ENST00000416486 427 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC114814.2-201ENST00000419195 485 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.6□□□□□ -1.83
RFX4Q33E94 ZNF965P-201ENST00000432501 817 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 CEACAMP9-201ENST00000442990 513 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 RPS29P31-201ENST00000446147 164 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 ANP32BP2-201ENST00000454525 545 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX4Q33E94 AC007537.2-201ENST00000472093 511 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC087385.1-201ENST00000475062 312 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC091167.1-201ENST00000492017 396 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC023050.1-201ENST00000498198 304 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.6□□□□□ -1.83
RFX4Q33E94 AC108475.1-201ENST00000507880 950 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.6□□□□□ -1.83
RFX4Q33E94 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.6□□□□□ -1.83
RFX4Q33E94 AC108120.2-201ENST00000512973 294 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 RNU6-1004P-201ENST00000516584 111 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 RNA5SP309-201ENST00000516670 106 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.6□□□□□ -1.83
RFX4Q33E94 OR4C2P-201ENST00000530855 1064 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC009643.1-201ENST00000532030 391 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.6□□□□□ -1.83
RFX4Q33E94 AC067852.4-201ENST00000590314 478 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC006116.5-201ENST00000591936 559 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC008745.1-201ENST00000604064 271 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX4Q33E94 AL021368.1-201ENST00000607490 540 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 MIR6820-201ENST00000611508 62 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC114781.5-201ENST00000615297 108 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.6□□□□□ -1.83
RFX4Q33E94 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFX4Q33E94 LARP1BP1-201ENST00000506036 1359 ntBASIC3.6□□□□□ -1.83
RFX4Q33E94 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX4Q33E94 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RFX4Q33E94 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RFX4Q33E94 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RFX4Q33E94 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
RFX4Q33E94 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.59□□□□□ -1.83
RFX4Q33E94 SAGE2P-201ENST00000420011 2126 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
RFX4Q33E94 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFX4Q33E94 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFX4Q33E94 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFX4Q33E94 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFX4Q33E94 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFX4Q33E94 MIR383-201ENST00000362257 73 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 SNORD115-48-201ENST00000364764 76 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFX4Q33E94 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFX4Q33E94 RN7SKP285-201ENST00000410137 318 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 HSPE1P12-201ENST00000412576 301 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.59□□□□□ -1.83
RFX4Q33E94 AL592293.2-201ENST00000422292 996 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 MORF4L1P7-201ENST00000426038 703 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 FAR1P1-201ENST00000427163 934 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.59□□□□□ -1.83
RFX4Q33E94 HMGB3P5-201ENST00000428894 612 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 MTCO1P52-201ENST00000433928 531 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.59□□□□□ -1.83
RFX4Q33E94 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.59□□□□□ -1.83
RFX4Q33E94 RPL7L1P8-201ENST00000469911 741 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.59□□□□□ -1.83
RFX4Q33E94 ARL2BPP6-201ENST00000512757 439 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 FTH1P9-201ENST00000513251 355 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 RN7SKP60-201ENST00000516985 239 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AC022790.1-201ENST00000522872 204 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AL139174.1-201ENST00000531489 886 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.59□□□□□ -1.83
RFX4Q33E94 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFX4Q33E94 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.59□□□□□ -1.83
RFX4Q33E94 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.59□□□□□ -1.83
RFX4Q33E94 AC091516.1-201ENST00000549191 703 ntBASIC3.59□□□□□ -1.83
RFX4Q33E94 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms