Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RN7SKP157-201ENST00000516174 282 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 NPM1P47-201ENST00000560843 856 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AL133247.2-201ENST00000603236 482 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC008739.3-201ENST00000603262 127 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC009237.17-201ENST00000618111 748 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC079684.1-201ENST00000621405 437 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC007342.8-201ENST00000623278 678 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 HPVC1-201ENST00000629899 1198 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AL034408.1-202ENST00000636088 415 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC138393.1-206ENST00000540997 1886 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 DCAF13P3-201ENST00000561147 1334 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 RNA5SP119-201ENST00000362715 117 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 Y_RNA.333-201ENST00000365274 102 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 U3.15-201ENST00000365398 212 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 RNU6-761P-201ENST00000384148 107 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 RNU4-31P-201ENST00000384211 141 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 HIGD1AP4-201ENST00000430194 280 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC023512.1-201ENST00000444513 499 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AL627224.1-201ENST00000448334 444 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC021146.7-201ENST00000509604 775 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC021146.3-201ENST00000511911 260 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC078899.5-201ENST00000612475 178 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AC124312.6-202ENST00000623624 418 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AF001550.2-201ENST00000636643 217 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AL773545.4-201ENST00000637262 310 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 AL513478.4-201ENST00000641636 310 ntBASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM1Q2M3G4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC092435.4-201ENST00000623012 4159 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC015813.6-201ENST00000624409 5808 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 SNORD46.1-201ENST00000364139 104 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 RNU6-40P-201ENST00000384254 107 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 RPL26P37-201ENST00000411983 438 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 CR848007.2-201ENST00000424918 787 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 MTND2P21-201ENST00000436242 1042 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC010469.1-201ENST00000463864 576 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 HMGB1P21-201ENST00000502313 581 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 UBE2CP3-201ENST00000502715 450 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 SOD1P3-201ENST00000518682 454 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC087272.1-201ENST00000523624 533 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 RN7SL339P-201ENST00000580597 296 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC005972.3-201ENST00000606304 481 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC004825.2-201ENST00000616634 455 ntBASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 AC119674.1-207ENST00000641355 633 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms