Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 RNU6-319P-201ENST00000516025 108 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 RN7SKP83-201ENST00000516512 178 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC022695.1-201ENST00000522089 237 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 HIGD1AP5-201ENST00000529959 259 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 OR8R1P-201ENST00000543943 764 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC022146.1-201ENST00000595307 847 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 RNU1-30P-201ENST00000606575 163 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H3AP68431 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H3AP68431 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
HIST1H3AP68431 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.28□□□□□ -1.89
HIST1H3AP68431 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 MIR320B1-201ENST00000390209 79 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC004975.1-201ENST00000428733 208 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 HMGB3P5-201ENST00000428894 612 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 SETD6P1-201ENST00000444575 317 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 NUTF2P7-201ENST00000453086 375 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 AP000873.1-201ENST00000463987 400 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 RPS20P21-201ENST00000466859 343 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 VN1R105P-201ENST00000486595 910 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC008489.1-201ENST00000524271 483 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 OR4C2P-201ENST00000530855 1064 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 RN7SL703P-201ENST00000578485 302 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 MIR6875-201ENST00000617506 72 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC139769.3-201ENST00000618383 175 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 AL354798.1-201ENST00000622505 329 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC116563.2-201ENST00000624751 535 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC092159.4-201ENST00000624944 550 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 AC066616.2-201ENST00000559334 1481 ntBASIC3.27□□□□□ -1.89
HIST1H3AP68431 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.27□□□□□ -1.89
HIST1H3AP68431 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HIST1H3AP68431 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 AL591419.1-201ENST00000427423 339 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 MOB1AP1-201ENST00000430903 535 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 OR6C72P-201ENST00000451403 892 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 TVP23BP2-201ENST00000455082 615 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 AL136097.1-201ENST00000456945 913 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 MTCYBP14-201ENST00000457471 715 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 NDUFB4P9-201ENST00000511646 388 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 AC087499.8-201ENST00000578406 226 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 MIR4286-201ENST00000580651 93 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 MIR5187-201ENST00000583479 76 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 AC115621.1-201ENST00000604653 858 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 AL163642.2-201ENST00000604722 1019 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 AC024560.2-201ENST00000507981 1497 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms