Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.7□□□□□ -1.82
VSX2P58304 AC005912.1-201ENST00000495392 255 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.7□□□□□ -1.82
VSX2P58304 AC010627.1-201ENST00000503819 1294 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AC109458.1-201ENST00000508858 316 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.7□□□□□ -1.82
VSX2P58304 RNA5SP143-201ENST00000516936 115 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AC022695.1-201ENST00000522089 237 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AC022784.5-201ENST00000522241 437 ntBASIC3.7□□□□□ -1.82
VSX2P58304 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSX2P58304 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.7□□□□□ -1.82
VSX2P58304 CYCSP30-201ENST00000546447 172 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.7□□□□□ -1.82
VSX2P58304 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.7□□□□□ -1.82
VSX2P58304 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.7□□□□□ -1.82
VSX2P58304 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.7□□□□□ -1.82
VSX2P58304 AC110741.2-201ENST00000605278 268 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.7□□□□□ -1.82
VSX2P58304 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.7□□□□□ -1.82
VSX2P58304 AC119674.1-212ENST00000641155 993 ntBASIC3.7□□□□□ -1.82
VSX2P58304 OR5AC4P-202ENST00000642086 985 ntBASIC3.7□□□□□ -1.82
VSX2P58304 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSX2P58304 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSX2P58304 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
VSX2P58304 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VSX2P58304 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSX2P58304 AL122126.1-201ENST00000546905 1318 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.69□□□□□ -1.82
VSX2P58304 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VSX2P58304 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.69□□□□□ -1.82
VSX2P58304 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VSX2P58304 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.69□□□□□ -1.82
VSX2P58304 MTCO1P14-201ENST00000441695 1559 ntBASIC3.69□□□□□ -1.82
VSX2P58304 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VSX2P58304 RNU6-31P-201ENST00000384388 108 ntBASIC3.69□□□□□ -1.82
VSX2P58304 MIR23B-201ENST00000384832 97 ntBASIC3.69□□□□□ -1.82
VSX2P58304 AL590704.1-201ENST00000402856 794 ntBASIC3.69□□□□□ -1.82
VSX2P58304 SNORA3.3-201ENST00000408712 125 ntBASIC3.69□□□□□ -1.82
VSX2P58304 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.69□□□□□ -1.82
VSX2P58304 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.69□□□□□ -1.82
VSX2P58304 AMD1P2-201ENST00000412936 992 ntBASIC3.69□□□□□ -1.82
VSX2P58304 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.69□□□□□ -1.82
VSX2P58304 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VSX2P58304 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.69□□□□□ -1.82
VSX2P58304 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.69□□□□□ -1.82
VSX2P58304 AC093698.1-201ENST00000423843 571 ntBASIC3.69□□□□□ -1.82
VSX2P58304 KCTD9P3-201ENST00000434597 1169 ntBASIC3.69□□□□□ -1.82
VSX2P58304 TPTE2P3-201ENST00000441562 1189 ntBASIC3.69□□□□□ -1.82
VSX2P58304 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.69□□□□□ -1.82
VSX2P58304 Z95327.1-201ENST00000446082 482 ntBASIC3.69□□□□□ -1.82
VSX2P58304 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.69□□□□□ -1.82
VSX2P58304 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.69□□□□□ -1.82
VSX2P58304 RPL7P24-201ENST00000493052 752 ntBASIC3.69□□□□□ -1.82
VSX2P58304 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
VSX2P58304 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.69□□□□□ -1.82
VSX2P58304 AC026726.1-201ENST00000512859 601 ntBASIC3.69□□□□□ -1.82
VSX2P58304 ACTR6P1-201ENST00000514311 1104 ntBASIC3.69□□□□□ -1.82
VSX2P58304 RN7SKP141-201ENST00000516167 338 ntBASIC3.69□□□□□ -1.82
VSX2P58304 RNU1-45P-201ENST00000517191 141 ntBASIC3.69□□□□□ -1.82
VSX2P58304 AC023632.4-201ENST00000517783 191 ntBASIC3.69□□□□□ -1.82
VSX2P58304 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.69□□□□□ -1.82
VSX2P58304 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.69□□□□□ -1.82
VSX2P58304 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VSX2P58304 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VSX2P58304 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.69□□□□□ -1.82
VSX2P58304 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.69□□□□□ -1.82
VSX2P58304 AC074029.2-201ENST00000551045 634 ntBASIC3.69□□□□□ -1.82
VSX2P58304 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.69□□□□□ -1.82
VSX2P58304 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.69□□□□□ -1.82
VSX2P58304 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.69□□□□□ -1.82
VSX2P58304 AL451086.1-201ENST00000605596 223 ntBASIC3.69□□□□□ -1.82
VSX2P58304 MIR486-1-201ENST00000612171 68 ntBASIC3.69□□□□□ -1.82
VSX2P58304 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.69□□□□□ -1.82
VSX2P58304 AL392048.1-201ENST00000613946 534 ntBASIC3.69□□□□□ -1.82
VSX2P58304 AL356863.1-201ENST00000623378 1080 ntBASIC3.69□□□□□ -1.82
VSX2P58304 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VSX2P58304 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VSX2P58304 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.69□□□□□ -1.82
VSX2P58304 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VSX2P58304 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VSX2P58304 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VSX2P58304 SPATA2P1-201ENST00000431223 2055 ntBASIC3.68□□□□□ -1.82
VSX2P58304 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.68□□□□□ -1.82
VSX2P58304 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 OR4A15-201ENST00000314706 1035 ntBASIC3.68□□□□□ -1.82
VSX2P58304 AC007685.1-201ENST00000329806 452 ntBASIC3.68□□□□□ -1.82
VSX2P58304 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 MIR7-1-201ENST00000384871 110 ntBASIC3.68□□□□□ -1.82
VSX2P58304 MIR554-201ENST00000384874 96 ntBASIC3.68□□□□□ -1.82
VSX2P58304 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VSX2P58304 ZNF602P-201ENST00000405929 924 ntBASIC3.68□□□□□ -1.82
VSX2P58304 RN7SKP156-201ENST00000410308 342 ntBASIC3.68□□□□□ -1.82
VSX2P58304 RN7SKP159-201ENST00000410657 292 ntBASIC3.68□□□□□ -1.82
VSX2P58304 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.68□□□□□ -1.82
VSX2P58304 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VSX2P58304 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.68□□□□□ -1.82
VSX2P58304 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.68□□□□□ -1.82
VSX2P58304 AC096638.2-201ENST00000434965 711 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms