Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA1P56159 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.27□□□□□ -1.57
GFRA1P56159 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.27□□□□□ -1.57
GFRA1P56159 AC131971.1-201ENST00000332881 1482 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
GFRA1P56159 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 RNU6-282P-201ENST00000365357 103 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GFRA1P56159 SNORA70.9-201ENST00000384370 135 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GFRA1P56159 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AL049693.1-201ENST00000402760 611 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AC078974.1-201ENST00000411597 223 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.27□□□□□ -1.57
GFRA1P56159 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.27□□□□□ -1.57
GFRA1P56159 NUP35P2-201ENST00000416748 943 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AC013429.2-201ENST00000418798 781 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AC012065.2-201ENST00000421295 375 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 OR51AB1P-201ENST00000429046 620 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AL590233.1-201ENST00000430017 456 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 USP24P1-201ENST00000433802 779 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.27□□□□□ -1.57
GFRA1P56159 MTND4LP16-201ENST00000440828 295 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AC023141.8-201ENST00000442554 208 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.27□□□□□ -1.57
GFRA1P56159 NXT1P1-201ENST00000458481 316 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AP000852.1-201ENST00000472460 573 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AC012123.2-201ENST00000485809 248 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 RPS4XP14-201ENST00000493072 781 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AC093677.1-201ENST00000514414 678 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.27□□□□□ -1.57
GFRA1P56159 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.27□□□□□ -1.57
GFRA1P56159 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
GFRA1P56159 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.27□□□□□ -1.57
GFRA1P56159 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.27□□□□□ -1.57
GFRA1P56159 AC068790.5-201ENST00000602741 355 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.27□□□□□ -1.57
GFRA1P56159 AC127024.6-201ENST00000621598 424 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
GFRA1P56159 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 AP003122.6-201ENST00000623831 495 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GFRA1P56159 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.27□□□□□ -1.57
GFRA1P56159 AC017104.4-201ENST00000636283 1592 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 MIR3662-201ENST00000637030 95 ntBASIC5.27□□□□□ -1.57
GFRA1P56159 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
GFRA1P56159 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.27□□□□□ -1.57
GFRA1P56159 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
GFRA1P56159 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
GFRA1P56159 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
GFRA1P56159 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA1P56159 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.26□□□□□ -1.57
GFRA1P56159 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.26□□□□□ -1.57
GFRA1P56159 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.26□□□□□ -1.57
GFRA1P56159 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA1P56159 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA1P56159 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA1P56159 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA1P56159 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA1P56159 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
GFRA1P56159 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA1P56159 RNU6-249P-201ENST00000363016 102 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 Y_RNA.160-201ENST00000363677 92 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 RNA5SP435-201ENST00000364044 108 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA1P56159 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
GFRA1P56159 RNU6-761P-201ENST00000384148 107 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 RNU6-1009P-201ENST00000390996 107 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 RPL31P1-201ENST00000398116 372 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 BTBD10P2-201ENST00000404779 676 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 AMD1P2-201ENST00000412936 992 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.26□□□□□ -1.57
GFRA1P56159 AC093155.2-201ENST00000420734 937 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.26□□□□□ -1.57
GFRA1P56159 CYCSP12-201ENST00000437729 300 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 HMGB3P12-201ENST00000438745 556 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.26□□□□□ -1.57
GFRA1P56159 SETP20-201ENST00000457046 852 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 snoU13.8-201ENST00000458890 104 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 PPIAP21-201ENST00000464473 501 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 RN7SL273P-201ENST00000481561 299 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 RPL7P51-201ENST00000490532 749 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 MTCYBP18-201ENST00000501056 747 ntBASIC5.26□□□□□ -1.57
GFRA1P56159 RNF138P1-201ENST00000502765 546 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms