Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
PKNOX1P55347 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKNOX1P55347 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.79□□□□□ -1.8
PKNOX1P55347 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AL138878.1-201ENST00000405131 347 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 HSPE1P8-201ENST00000406997 288 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 UBE2V1P15-201ENST00000407776 448 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 XKRYP4-201ENST00000414395 483 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.79□□□□□ -1.8
PKNOX1P55347 FAR1P1-201ENST00000427163 934 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AL035458.1-201ENST00000433096 585 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC007000.2-201ENST00000442564 487 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 XKRYP5-201ENST00000449659 483 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 RPL21P11-201ENST00000461458 483 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 RN7SL459P-201ENST00000481078 302 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKNOX1P55347 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC010285.3-201ENST00000511668 676 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 USP9YP5-201ENST00000511770 630 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 SNORA70.14-201ENST00000516205 110 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC138701.1-201ENST00000524329 714 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.79□□□□□ -1.8
PKNOX1P55347 OR4A12P-201ENST00000530847 918 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC092747.2-201ENST00000545069 983 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.79□□□□□ -1.8
PKNOX1P55347 YPEL5P3-201ENST00000547227 352 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKNOX1P55347 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AGGF1P8-201ENST00000562979 1000 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 NF1P5-201ENST00000588287 448 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC008745.1-201ENST00000604064 271 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AL390816.3-201ENST00000604527 1066 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AC010857.1-201ENST00000606398 594 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AL713922.2-201ENST00000619384 716 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AC024023.1-201ENST00000624530 922 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PKNOX1P55347 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKNOX1P55347 AC090229.1-201ENST00000590983 1609 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 CASC19-261ENST00000641853 1638 ntBASIC3.79□□□□□ -1.8
PKNOX1P55347 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKNOX1P55347 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKNOX1P55347 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKNOX1P55347 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.79□□□□□ -1.8
PKNOX1P55347 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKNOX1P55347 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.79□□□□□ -1.8
PKNOX1P55347 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKNOX1P55347 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PKNOX1P55347 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKNOX1P55347 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PKNOX1P55347 RNU6-252P-201ENST00000363232 107 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 RNU1-87P-201ENST00000363727 170 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKNOX1P55347 MIR199A2-201ENST00000385289 110 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 RHEBP3-201ENST00000411920 351 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AL357078.2-201ENST00000416486 427 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 RPL18P10-201ENST00000425606 538 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AL365396.1-201ENST00000430854 671 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AL356276.2-201ENST00000435919 558 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AC009263.1-201ENST00000441193 1239 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 MTCO3P16-201ENST00000454456 754 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 MTCO3P20-201ENST00000454926 688 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AC011037.1-201ENST00000483964 558 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.78□□□□□ -1.8
PKNOX1P55347 RNA5SP179-201ENST00000517284 121 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.78□□□□□ -1.8
PKNOX1P55347 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AC093014.1-201ENST00000548926 724 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 SNRPGP1-201ENST00000553864 222 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.78□□□□□ -1.8
PKNOX1P55347 AL161713.1-201ENST00000555538 145 ntBASIC3.78□□□□□ -1.8
PKNOX1P55347 AC106785.3-201ENST00000564064 847 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms