Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXG1P55316 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXG1P55316 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXG1P55316 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
FOXG1P55316 AL121657.1-201ENST00000327215 531 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 Y_RNA.11-201ENST00000362375 109 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 Y_RNA.408-201ENST00000383987 102 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 MT-TP-201ENST00000387461 68 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 Z97832.1-201ENST00000402490 328 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXG1P55316 PAICSP7-201ENST00000419829 962 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 MTCO3P1-205ENST00000422088 832 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 CYCSP46-201ENST00000423569 204 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXG1P55316 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXG1P55316 USP9YP31-201ENST00000431405 881 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 RPS27P18-201ENST00000431701 247 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC093716.1-201ENST00000435923 377 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 Z80107.2-201ENST00000445127 392 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC010733.1-201ENST00000451515 401 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXG1P55316 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXG1P55316 AMD1P1-201ENST00000457220 922 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 AC021660.1-201ENST00000465006 554 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC063943.1-201ENST00000465434 453 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 AL049874.2-201ENST00000492636 288 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXG1P55316 AC147055.4-201ENST00000504399 745 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXG1P55316 AC098799.2-201ENST00000509466 868 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC074344.1-201ENST00000512823 224 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 RN7SKP141-201ENST00000516167 338 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 IGHV3-63-201ENST00000518422 341 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXG1P55316 AP006245.2-201ENST00000522004 300 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXG1P55316 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXG1P55316 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 BGLT3-201ENST00000564523 994 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXG1P55316 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXG1P55316 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXG1P55316 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXG1P55316 AC020910.3-201ENST00000603701 874 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AL022394.1-201ENST00000606979 292 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AL158211.4-201ENST00000606988 584 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC025594.3-201ENST00000613068 790 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC090517.2-201ENST00000614966 680 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AL049794.2-201ENST00000616301 365 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC073569.3-201ENST00000619055 682 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXG1P55316 PCMTD1P7-201ENST00000634506 357 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
FOXG1P55316 AC073136.1-201ENST00000449426 2884 ntBASIC4.33□□□□□ -1.72
FOXG1P55316 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXG1P55316 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXG1P55316 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXG1P55316 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXG1P55316 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXG1P55316 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
FOXG1P55316 UGT2B26P-201ENST00000508672 1613 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 AC002525.1-201ENST00000624392 1622 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXG1P55316 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXG1P55316 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXG1P55316 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXG1P55316 ZNF652P1-201ENST00000442420 1309 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXG1P55316 AC103591.2-201ENST00000265259 766 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 AC016716.1-201ENST00000265882 708 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXG1P55316 RNU6-560P-201ENST00000364007 108 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 Y_RNA.554-201ENST00000384672 102 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 RNU6-114P-201ENST00000384704 105 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 AC104297.1-201ENST00000393779 870 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXG1P55316 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXG1P55316 ATG4AP1-201ENST00000416893 538 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 AL109913.1-201ENST00000421173 514 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXG1P55316 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXG1P55316 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXG1P55316 MTND1P14-201ENST00000427400 950 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 CNOT7P1-201ENST00000429006 852 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 OR2B7P-201ENST00000429302 934 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXG1P55316 AC008072.1-201ENST00000434254 824 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXG1P55316 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXG1P55316 AC004865.1-201ENST00000442276 1003 ntBASIC4.32□□□□□ -1.72
FOXG1P55316 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms