Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GCNT6-201ENST00000379591 934 ntBASIC4.42□□□□□ -1.7
VCPP55072 RNA5SP39-201ENST00000411245 120 ntBASIC4.42□□□□□ -1.7
VCPP55072 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.42□□□□□ -1.7
VCPP55072 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VCPP55072 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.42□□□□□ -1.7
VCPP55072 AC091286.1-201ENST00000431233 461 ntBASIC4.42□□□□□ -1.7
VCPP55072 MTND4LP7-201ENST00000431728 294 ntBASIC4.42□□□□□ -1.7
VCPP55072 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
VCPP55072 RN7SL585P-201ENST00000470538 280 ntBASIC4.42□□□□□ -1.7
VCPP55072 PPIAP15-201ENST00000479662 484 ntBASIC4.42□□□□□ -1.7
VCPP55072 AC093311.1-201ENST00000506586 2021 ntBASIC4.42□□□□□ -1.7
VCPP55072 AC093770.1-201ENST00000511559 571 ntBASIC4.42□□□□□ -1.7
VCPP55072 GMPSP1-201ENST00000514075 579 ntBASIC4.42□□□□□ -1.7
VCPP55072 PAICSP4-201ENST00000517543 1253 ntBASIC4.42□□□□□ -1.7
VCPP55072 DUXAP2-201ENST00000519198 589 ntBASIC4.42□□□□□ -1.7
VCPP55072 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.42□□□□□ -1.7
VCPP55072 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.42□□□□□ -1.7
VCPP55072 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.42□□□□□ -1.7
VCPP55072 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.42□□□□□ -1.7
VCPP55072 AC055764.2-201ENST00000610089 670 ntBASIC4.42□□□□□ -1.7
VCPP55072 AL391261.4-201ENST00000616012 481 ntBASIC4.42□□□□□ -1.7
VCPP55072 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.42□□□□□ -1.7
VCPP55072 AC010608.2-201ENST00000624830 470 ntBASIC4.42□□□□□ -1.7
VCPP55072 AC008013.2-202ENST00000637965 364 ntBASIC4.42□□□□□ -1.7
VCPP55072 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.42□□□□□ -1.7
VCPP55072 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VCPP55072 MTND4P21-201ENST00000453886 1357 ntBASIC4.41□□□□□ -1.7
VCPP55072 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
VCPP55072 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
VCPP55072 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VCPP55072 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VCPP55072 MIR218-2-201ENST00000385006 110 ntBASIC4.41□□□□□ -1.7
VCPP55072 MIR34B-201ENST00000385076 84 ntBASIC4.41□□□□□ -1.7
VCPP55072 ENSAP1-201ENST00000392855 326 ntBASIC4.41□□□□□ -1.7
VCPP55072 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VCPP55072 RNA5SP239-201ENST00000410218 129 ntBASIC4.41□□□□□ -1.7
VCPP55072 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 AC108032.1-201ENST00000416706 207 ntBASIC4.41□□□□□ -1.7
VCPP55072 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.41□□□□□ -1.7
VCPP55072 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 CEACAMP1-201ENST00000434624 1035 ntBASIC4.41□□□□□ -1.7
VCPP55072 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.41□□□□□ -1.7
VCPP55072 NOTCH2P1-201ENST00000443481 624 ntBASIC4.41□□□□□ -1.7
VCPP55072 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.41□□□□□ -1.7
VCPP55072 PLGLA-201ENST00000465668 449 ntBASIC4.41□□□□□ -1.7
VCPP55072 RPL7P9-201ENST00000468715 747 ntBASIC4.41□□□□□ -1.7
VCPP55072 BNIP3P41-201ENST00000503774 571 ntBASIC4.41□□□□□ -1.7
VCPP55072 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VCPP55072 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.41□□□□□ -1.7
VCPP55072 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.41□□□□□ -1.7
VCPP55072 AC017037.1-201ENST00000508460 471 ntBASIC4.41□□□□□ -1.7
VCPP55072 AC119751.5-201ENST00000514077 770 ntBASIC4.41□□□□□ -1.7
VCPP55072 AP003168.1-201ENST00000530091 307 ntBASIC4.41□□□□□ -1.7
VCPP55072 UBTFL9-201ENST00000534504 1148 ntBASIC4.41□□□□□ -1.7
VCPP55072 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.41□□□□□ -1.7
VCPP55072 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.41□□□□□ -1.7
VCPP55072 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.41□□□□□ -1.7
VCPP55072 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.41□□□□□ -1.7
VCPP55072 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 AC027176.2-201ENST00000559166 746 ntBASIC4.41□□□□□ -1.7
VCPP55072 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.41□□□□□ -1.7
VCPP55072 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.41□□□□□ -1.7
VCPP55072 AL049844.2-201ENST00000604280 628 ntBASIC4.41□□□□□ -1.7
VCPP55072 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VCPP55072 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.41□□□□□ -1.7
VCPP55072 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VCPP55072 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.41□□□□□ -1.7
VCPP55072 AC064801.1-201ENST00000612025 407 ntBASIC4.41□□□□□ -1.7
VCPP55072 RMST_9.1-201ENST00000619945 193 ntBASIC4.41□□□□□ -1.7
VCPP55072 AC091948.2-201ENST00000636510 279 ntBASIC4.41□□□□□ -1.7
VCPP55072 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.41□□□□□ -1.7
VCPP55072 AL161912.2-201ENST00000565707 3007 ntBASIC4.41□□□□□ -1.7
VCPP55072 AC097504.1-201ENST00000515103 2415 ntBASIC4.41□□□□□ -1.7
VCPP55072 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
VCPP55072 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.4□□□□□ -1.7
VCPP55072 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.4□□□□□ -1.7
VCPP55072 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.4□□□□□ -1.7
VCPP55072 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.4□□□□□ -1.7
VCPP55072 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.7
VCPP55072 SNORD74.4-201ENST00000364129 80 ntBASIC4.4□□□□□ -1.71
VCPP55072 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VCPP55072 RNU6-40P-201ENST00000384254 107 ntBASIC4.4□□□□□ -1.71
VCPP55072 RNU6-31P-201ENST00000384388 108 ntBASIC4.4□□□□□ -1.71
VCPP55072 AP000357.1-201ENST00000409926 1165 ntBASIC4.4□□□□□ -1.71
VCPP55072 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.4□□□□□ -1.71
VCPP55072 MTND4P11-201ENST00000417020 1058 ntBASIC4.4□□□□□ -1.71
VCPP55072 FAR1P1-201ENST00000427163 934 ntBASIC4.4□□□□□ -1.71
VCPP55072 ELOCP18-201ENST00000434209 337 ntBASIC4.4□□□□□ -1.71
VCPP55072 AL691517.1-201ENST00000440833 1235 ntBASIC4.4□□□□□ -1.71
VCPP55072 AL512326.1-201ENST00000443050 721 ntBASIC4.4□□□□□ -1.71
VCPP55072 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.4□□□□□ -1.71
VCPP55072 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.4□□□□□ -1.71
VCPP55072 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms