Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.03□□□□□ -1.44
LIG3P49916 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 OR10R3P-201ENST00000361688 942 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 SNORA70.6-201ENST00000383934 134 ntBASIC6.03□□□□□ -1.44
LIG3P49916 RNU6-952P-201ENST00000391164 108 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 AL133384.1-201ENST00000412744 351 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 RPEP2-201ENST00000432149 701 ntBASIC6.03□□□□□ -1.44
LIG3P49916 CBX1P1-201ENST00000440184 427 ntBASIC6.03□□□□□ -1.44
LIG3P49916 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.03□□□□□ -1.44
LIG3P49916 AC092001.1-201ENST00000453012 261 ntBASIC6.03□□□□□ -1.44
LIG3P49916 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.03□□□□□ -1.44
LIG3P49916 RPL12P39-201ENST00000455456 496 ntBASIC6.03□□□□□ -1.44
LIG3P49916 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 RPL7AP10-201ENST00000481016 791 ntBASIC6.03□□□□□ -1.44
LIG3P49916 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.03□□□□□ -1.44
LIG3P49916 RPL35P6-201ENST00000490024 372 ntBASIC6.03□□□□□ -1.44
LIG3P49916 RN7SL193P-201ENST00000491708 276 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AC091951.2-201ENST00000500762 203 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 Y_RNA.672-201ENST00000516289 104 ntBASIC6.03□□□□□ -1.44
LIG3P49916 RNA5SP438-201ENST00000516561 112 ntBASIC6.03□□□□□ -1.44
LIG3P49916 Y_RNA.693-201ENST00000516641 110 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AC104986.1-201ENST00000517978 436 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 EIF4A2P5-201ENST00000529914 499 ntBASIC6.03□□□□□ -1.44
LIG3P49916 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 RAB11AP2-201ENST00000545905 639 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 LSM3P2-201ENST00000551246 273 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AC090515.3-201ENST00000560431 315 ntBASIC6.03□□□□□ -1.44
LIG3P49916 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 AC025678.1-201ENST00000567861 338 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 AC090312.1-201ENST00000580637 348 ntBASIC6.03□□□□□ -1.44
LIG3P49916 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.03□□□□□ -1.44
LIG3P49916 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 AC011816.2-201ENST00000607089 556 ntBASIC6.03□□□□□ -1.44
LIG3P49916 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.03□□□□□ -1.44
LIG3P49916 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 OR2L1P-202ENST00000641567 1023 ntBASIC6.03□□□□□ -1.44
LIG3P49916 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.03□□□□□ -1.44
LIG3P49916 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
LIG3P49916 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIG3P49916 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
LIG3P49916 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LIG3P49916 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LIG3P49916 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LIG3P49916 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LIG3P49916 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.02□□□□□ -1.45
LIG3P49916 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.02□□□□□ -1.45
LIG3P49916 Y_RNA.409-201ENST00000383990 98 ntBASIC6.02□□□□□ -1.45
LIG3P49916 DHFRP6-201ENST00000401776 268 ntBASIC6.02□□□□□ -1.45
LIG3P49916 HMGN1P20-201ENST00000411849 300 ntBASIC6.02□□□□□ -1.45
LIG3P49916 TPMTP2-201ENST00000414372 726 ntBASIC6.02□□□□□ -1.45
LIG3P49916 RPL35AP3-201ENST00000414680 288 ntBASIC6.02□□□□□ -1.45
LIG3P49916 RPL21P111-201ENST00000418453 477 ntBASIC6.02□□□□□ -1.45
LIG3P49916 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.02□□□□□ -1.45
LIG3P49916 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.02□□□□□ -1.45
LIG3P49916 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LIG3P49916 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.02□□□□□ -1.45
LIG3P49916 AL136231.1-201ENST00000429407 730 ntBASIC6.02□□□□□ -1.45
LIG3P49916 YWHAZP8-201ENST00000436935 731 ntBASIC6.02□□□□□ -1.45
LIG3P49916 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.02□□□□□ -1.45
LIG3P49916 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.02□□□□□ -1.45
LIG3P49916 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.02□□□□□ -1.45
LIG3P49916 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.02□□□□□ -1.45
LIG3P49916 ACA64.1-201ENST00000459171 127 ntBASIC6.02□□□□□ -1.45
LIG3P49916 RN7SL269P-201ENST00000467795 305 ntBASIC6.02□□□□□ -1.45
LIG3P49916 AC087312.1-201ENST00000471411 480 ntBASIC6.02□□□□□ -1.45
LIG3P49916 EIF3LP3-201ENST00000495197 822 ntBASIC6.02□□□□□ -1.45
LIG3P49916 OR5H5P-201ENST00000503164 928 ntBASIC6.02□□□□□ -1.45
LIG3P49916 SCARNA18.1-201ENST00000516330 83 ntBASIC6.02□□□□□ -1.45
LIG3P49916 COX6CP8-201ENST00000522620 226 ntBASIC6.02□□□□□ -1.45
LIG3P49916 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.02□□□□□ -1.45
LIG3P49916 WBP1LP3-201ENST00000523033 208 ntBASIC6.02□□□□□ -1.45
LIG3P49916 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.02□□□□□ -1.45
LIG3P49916 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.02□□□□□ -1.45
LIG3P49916 TRIM51DP-201ENST00000529746 596 ntBASIC6.02□□□□□ -1.45
LIG3P49916 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.02□□□□□ -1.45
LIG3P49916 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.02□□□□□ -1.45
LIG3P49916 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms