Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PPIAP3-201ENST00000450588 505 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 AC087385.1-201ENST00000475062 312 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 FTH1P9-201ENST00000513251 355 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CR1P49238 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC006116.5-201ENST00000591936 559 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 VN1R79P-201ENST00000593540 513 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 NTAN1P1-201ENST00000603150 646 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 AC005229.3-201ENST00000603438 323 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC121761.2-201ENST00000617300 689 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 AC124312.6-202ENST00000623624 418 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 AC090617.9-201ENST00000623751 147 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC244205.2-202ENST00000635781 342 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CR1P49238 U6.107-201ENST00000637108 79 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CR1P49238 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CR1P49238 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CR1P49238 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CR1P49238 RNU6-1293P-201ENST00000384077 107 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 HMGB1P10-201ENST00000395823 563 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 MIR937-201ENST00000401271 86 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 DNAJC19P6-201ENST00000401853 280 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AL353692.2-201ENST00000407054 335 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CR1P49238 MTND4LP7-201ENST00000431728 294 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC073143.1-201ENST00000436316 395 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC069540.1-201ENST00000446320 988 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 FABP3P2-201ENST00000453169 399 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 SBDSP1-204ENST00000453858 737 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 RPS20P32-201ENST00000456044 356 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 HMGB3P30-201ENST00000457863 606 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC104689.1-201ENST00000473356 768 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC093663.2-201ENST00000484625 313 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 SNX5P1-201ENST00000505757 1041 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 IGBP1P5-201ENST00000507524 1000 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC026726.1-201ENST00000512859 601 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 CIR1P1-201ENST00000524055 1133 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CR1P49238 RFPL1S-203ENST00000539579 330 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC079610.2-201ENST00000604818 690 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC110741.2-201ENST00000605278 268 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 uc_338.32-201ENST00000615087 172 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 RNU6-156P-201ENST00000621869 107 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC004943.3-201ENST00000624116 600 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 AC010608.2-201ENST00000624830 470 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CR1P49238 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CR1P49238 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CR1P49238 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CR1P49238 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CR1P49238 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CR1P49238 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CR1P49238 AC119744.1-201ENST00000454746 1715 ntBASIC3.5□□□□□ -1.85
CX3CR1P49238 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CR1P49238 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CR1P49238 IPO8P1-201ENST00000455509 3109 ntBASIC3.49□□□□□ -1.85
CX3CR1P49238 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.49□□□□□ -1.85
CX3CR1P49238 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CR1P49238 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
CX3CR1P49238 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms