Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MTND5P28-201ENST00000438005 1594 ntBASIC4.58□□□□□ -1.68
HADHAP40939 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HADHAP40939 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HADHAP40939 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HADHAP40939 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HADHAP40939 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HADHAP40939 AC016716.1-201ENST00000265882 708 ntBASIC4.58□□□□□ -1.68
HADHAP40939 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
HADHAP40939 RNU1-108P-201ENST00000362556 161 ntBASIC4.58□□□□□ -1.68
HADHAP40939 RNA5SP28-201ENST00000363841 119 ntBASIC4.58□□□□□ -1.68
HADHAP40939 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HADHAP40939 RNU6-444P-201ENST00000383988 108 ntBASIC4.58□□□□□ -1.68
HADHAP40939 RNA5SP397-201ENST00000391323 118 ntBASIC4.58□□□□□ -1.68
HADHAP40939 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HADHAP40939 AC016397.1-201ENST00000412463 242 ntBASIC4.58□□□□□ -1.68
HADHAP40939 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.58□□□□□ -1.68
HADHAP40939 RPS12P5-201ENST00000423449 371 ntBASIC4.58□□□□□ -1.68
HADHAP40939 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.58□□□□□ -1.68
HADHAP40939 AC234779.1-201ENST00000425910 285 ntBASIC4.58□□□□□ -1.68
HADHAP40939 GTF2IP3-201ENST00000433887 494 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AL031313.1-201ENST00000448435 256 ntBASIC4.58□□□□□ -1.68
HADHAP40939 Z99714.1-201ENST00000450463 807 ntBASIC4.58□□□□□ -1.68
HADHAP40939 NPM1P13-201ENST00000452663 865 ntBASIC4.58□□□□□ -1.68
HADHAP40939 MRPL42P4-201ENST00000453267 443 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.58□□□□□ -1.68
HADHAP40939 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.58□□□□□ -1.68
HADHAP40939 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.58□□□□□ -1.68
HADHAP40939 AC010326.1-201ENST00000462726 602 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AC018635.1-201ENST00000468292 1030 ntBASIC4.58□□□□□ -1.68
HADHAP40939 RPS26P28-201ENST00000470806 348 ntBASIC4.58□□□□□ -1.68
HADHAP40939 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.58□□□□□ -1.68
HADHAP40939 RN7SL481P-201ENST00000477764 299 ntBASIC4.58□□□□□ -1.68
HADHAP40939 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HADHAP40939 IGLV2-34-201ENST00000490007 283 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.58□□□□□ -1.68
HADHAP40939 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.58□□□□□ -1.68
HADHAP40939 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.58□□□□□ -1.68
HADHAP40939 AP001207.2-201ENST00000519490 539 ntBASIC4.58□□□□□ -1.68
HADHAP40939 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HADHAP40939 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HADHAP40939 AC100770.1-201ENST00000532310 322 ntBASIC4.58□□□□□ -1.68
HADHAP40939 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
HADHAP40939 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.58□□□□□ -1.68
HADHAP40939 MIR4509-3-201ENST00000578671 94 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.58□□□□□ -1.68
HADHAP40939 MIR4509-2-201ENST00000583920 94 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AL583856.2-201ENST00000606298 543 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AL592148.2-201ENST00000612210 372 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AC099669.2-201ENST00000616549 437 ntBASIC4.58□□□□□ -1.68
HADHAP40939 CYCSP41-201ENST00000616920 296 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.58□□□□□ -1.68
HADHAP40939 MIR4509-1-201ENST00000618224 94 ntBASIC4.58□□□□□ -1.68
HADHAP40939 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AP000346.3-201ENST00000622821 210 ntBASIC4.58□□□□□ -1.68
HADHAP40939 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.58□□□□□ -1.68
HADHAP40939 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.58□□□□□ -1.68
HADHAP40939 FAM157B-203ENST00000639350 358 ntBASIC4.58□□□□□ -1.68
HADHAP40939 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.58□□□□□ -1.68
HADHAP40939 MFSD8-242ENST00000641690 4199 ntBASIC4.57□□□□□ -1.68
HADHAP40939 MFSD8-216ENST00000641147 4009 ntBASIC4.57□□□□□ -1.68
HADHAP40939 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HADHAP40939 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.57□□□□□ -1.68
HADHAP40939 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.57□□□□□ -1.68
HADHAP40939 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HADHAP40939 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HADHAP40939 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HADHAP40939 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.57□□□□□ -1.68
HADHAP40939 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HADHAP40939 HMGB1P5-201ENST00000255320 642 ntBASIC4.57□□□□□ -1.68
HADHAP40939 RNU6-224P-201ENST00000384055 107 ntBASIC4.57□□□□□ -1.68
HADHAP40939 RNU1-44P-201ENST00000384453 163 ntBASIC4.57□□□□□ -1.68
HADHAP40939 MIR141-201ENST00000384975 95 ntBASIC4.57□□□□□ -1.68
HADHAP40939 DSTNP4-201ENST00000399472 474 ntBASIC4.57□□□□□ -1.68
HADHAP40939 AL079342.2-201ENST00000403367 482 ntBASIC4.57□□□□□ -1.68
HADHAP40939 GSTA8P-201ENST00000404253 637 ntBASIC4.57□□□□□ -1.68
HADHAP40939 RN7SKP106-201ENST00000410832 272 ntBASIC4.57□□□□□ -1.68
HADHAP40939 RNU6-575P-201ENST00000411326 105 ntBASIC4.57□□□□□ -1.68
HADHAP40939 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.57□□□□□ -1.68
HADHAP40939 OSTCP5-201ENST00000425293 453 ntBASIC4.57□□□□□ -1.68
HADHAP40939 CNOT7P1-201ENST00000429006 852 ntBASIC4.57□□□□□ -1.68
HADHAP40939 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.57□□□□□ -1.68
HADHAP40939 RAB11AP1-201ENST00000442978 646 ntBASIC4.57□□□□□ -1.68
HADHAP40939 VN1R32P-201ENST00000452234 905 ntBASIC4.57□□□□□ -1.68
HADHAP40939 NDUFA12P1-201ENST00000455914 406 ntBASIC4.57□□□□□ -1.68
HADHAP40939 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.57□□□□□ -1.68
HADHAP40939 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.57□□□□□ -1.68
HADHAP40939 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.57□□□□□ -1.68
HADHAP40939 RN7SL860P-201ENST00000473738 223 ntBASIC4.57□□□□□ -1.68
HADHAP40939 AC090013.1-201ENST00000485147 480 ntBASIC4.57□□□□□ -1.68
HADHAP40939 SNX5P1-201ENST00000505757 1041 ntBASIC4.57□□□□□ -1.68
HADHAP40939 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.57□□□□□ -1.68
HADHAP40939 AC048346.1-201ENST00000510247 144 ntBASIC4.57□□□□□ -1.68
HADHAP40939 HMGB3P13-201ENST00000511263 607 ntBASIC4.57□□□□□ -1.68
HADHAP40939 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.57□□□□□ -1.68
HADHAP40939 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.57□□□□□ -1.68
HADHAP40939 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.57□□□□□ -1.68
HADHAP40939 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.57□□□□□ -1.68
HADHAP40939 AC044913.1-201ENST00000557200 430 ntBASIC4.57□□□□□ -1.68
HADHAP40939 AGGF1P6-201ENST00000569213 976 ntBASIC4.57□□□□□ -1.68
HADHAP40939 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms