Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 SNORD115-48-201ENST00000364764 76 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 RNA5SP97-201ENST00000365006 84 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHMT2P34897 RNU6-185P-201ENST00000384421 107 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SHMT2P34897 AC010385.1-201ENST00000412374 256 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 IFNNP1-201ENST00000429219 553 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 MTND4LP7-201ENST00000431728 294 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.83□□□□□ -1.8
SHMT2P34897 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 AL691517.1-201ENST00000440833 1235 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 MTCO3P43-201ENST00000440974 771 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 VN1R25P-201ENST00000443385 738 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 VN1R40P-201ENST00000455196 941 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SHMT2P34897 RPS3AP6-201ENST00000484430 795 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.83□□□□□ -1.8
SHMT2P34897 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.83□□□□□ -1.8
SHMT2P34897 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.83□□□□□ -1.8
SHMT2P34897 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHMT2P34897 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHMT2P34897 YPEL5P3-201ENST00000547227 352 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.83□□□□□ -1.8
SHMT2P34897 SNRPGP1-201ENST00000553864 222 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 CKS1BP1-201ENST00000555221 240 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.83□□□□□ -1.8
SHMT2P34897 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.83□□□□□ -1.8
SHMT2P34897 CBX3P2-202ENST00000583365 535 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.83□□□□□ -1.8
SHMT2P34897 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.83□□□□□ -1.8
SHMT2P34897 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.83□□□□□ -1.8
SHMT2P34897 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.83□□□□□ -1.8
SHMT2P34897 AP004607.9-201ENST00000618202 316 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.83□□□□□ -1.8
SHMT2P34897 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.83□□□□□ -1.8
SHMT2P34897 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHMT2P34897 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHMT2P34897 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SHMT2P34897 AL136964.1-201ENST00000622038 2990 ntBASIC3.83□□□□□ -1.8
SHMT2P34897 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHMT2P34897 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHMT2P34897 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
SHMT2P34897 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.82□□□□□ -1.8
SHMT2P34897 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.82□□□□□ -1.8
SHMT2P34897 MTND4P21-201ENST00000453886 1357 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 RNU1-18P-201ENST00000363062 164 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHMT2P34897 MIR92A2-201ENST00000385299 75 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.82□□□□□ -1.8
SHMT2P34897 Z97055.1-201ENST00000419730 712 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AC093698.1-201ENST00000423843 571 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 RPL7P2-201ENST00000427639 268 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AL160175.1-201ENST00000428124 247 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.82□□□□□ -1.8
SHMT2P34897 AC083863.1-201ENST00000438811 231 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 HMGB1P37-201ENST00000439613 609 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.82□□□□□ -1.8
SHMT2P34897 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.82□□□□□ -1.8
SHMT2P34897 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SHMT2P34897 AC089999.1-201ENST00000460336 374 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.82□□□□□ -1.8
SHMT2P34897 PPIAP15-201ENST00000479662 484 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 RPS4XP15-201ENST00000489210 795 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AC020593.1-201ENST00000507399 299 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SHMT2P34897 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.82□□□□□ -1.8
SHMT2P34897 SNORD116-26-201ENST00000516006 96 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.82□□□□□ -1.8
SHMT2P34897 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.82□□□□□ -1.8
SHMT2P34897 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.82□□□□□ -1.8
SHMT2P34897 AC005242.1-201ENST00000585658 438 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AL020997.2-201ENST00000602607 184 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AC040174.2-201ENST00000602701 465 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AC099676.1-201ENST00000608886 657 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 AC090912.3-201ENST00000609775 533 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.82□□□□□ -1.8
SHMT2P34897 LINC02471-203ENST00000641941 4752 ntBASIC3.82□□□□□ -1.8
SHMT2P34897 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.82□□□□□ -1.8
SHMT2P34897 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.82□□□□□ -1.8
SHMT2P34897 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHMT2P34897 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.82□□□□□ -1.8
SHMT2P34897 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SHMT2P34897 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SHMT2P34897 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.81□□□□□ -1.8
SHMT2P34897 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SHMT2P34897 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.81□□□□□ -1.8
SHMT2P34897 AC007685.1-201ENST00000329806 452 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms