Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CASQ1P31415 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.13□□□□□ -1.75
CASQ1P31415 HSPE1P12-201ENST00000412576 301 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.13□□□□□ -1.75
CASQ1P31415 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.13□□□□□ -1.75
CASQ1P31415 OR5BE1P-201ENST00000425977 939 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 MOB1AP1-201ENST00000430903 535 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.13□□□□□ -1.75
CASQ1P31415 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.13□□□□□ -1.75
CASQ1P31415 AC023512.1-201ENST00000444513 499 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.13□□□□□ -1.75
CASQ1P31415 RN7SL860P-201ENST00000473738 223 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.13□□□□□ -1.75
CASQ1P31415 AC005351.1-201ENST00000511152 786 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.13□□□□□ -1.75
CASQ1P31415 AC117525.1-201ENST00000515228 503 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.13□□□□□ -1.75
CASQ1P31415 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.13□□□□□ -1.75
CASQ1P31415 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.13□□□□□ -1.75
CASQ1P31415 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.13□□□□□ -1.75
CASQ1P31415 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.13□□□□□ -1.75
CASQ1P31415 RPL12P25-202ENST00000598100 674 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 AC090510.2-201ENST00000617465 629 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.13□□□□□ -1.75
CASQ1P31415 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.13□□□□□ -1.75
CASQ1P31415 OR5BE1P-202ENST00000641168 1176 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CASQ1P31415 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CASQ1P31415 AC092326.2-201ENST00000624772 1561 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 ZNF542P-204ENST00000482727 1305 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CASQ1P31415 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CASQ1P31415 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.12□□□□□ -1.75
CASQ1P31415 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.12□□□□□ -1.75
CASQ1P31415 AC131971.1-201ENST00000332881 1482 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASQ1P31415 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.12□□□□□ -1.75
CASQ1P31415 SNORA51.2-201ENST00000364595 132 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CASQ1P31415 AL590290.1-201ENST00000405336 380 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 SNORA57.3-201ENST00000411095 141 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 TCEA1P2-201ENST00000420496 906 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 RPS3AP54-201ENST00000435535 734 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.12□□□□□ -1.75
CASQ1P31415 RPL23AP44-201ENST00000482216 473 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 RN7SL604P-201ENST00000492589 296 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 ARL2BPP6-201ENST00000512757 439 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.12□□□□□ -1.75
CASQ1P31415 OR4A12P-201ENST00000530847 918 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 CYCSP29-201ENST00000533731 318 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 SYF2P1-201ENST00000550658 413 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 MIR4425-201ENST00000580572 84 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.12□□□□□ -1.75
CASQ1P31415 HMGB1P51-201ENST00000605166 638 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 MIR6864-201ENST00000617935 70 ntBASIC4.12□□□□□ -1.75
CASQ1P31415 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CASQ1P31415 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASQ1P31415 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.12□□□□□ -1.75
CASQ1P31415 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.12□□□□□ -1.75
CASQ1P31415 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CASQ1P31415 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CASQ1P31415 MTCO1P8-201ENST00000416914 1523 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CASQ1P31415 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CASQ1P31415 RNU6-600P-201ENST00000362524 99 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 RNU1-132P-201ENST00000364300 164 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CASQ1P31415 EIF5P1-201ENST00000400019 1231 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 GTF3AP1-201ENST00000416942 1004 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.11□□□□□ -1.75
CASQ1P31415 RPS29P17-201ENST00000430795 166 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.11□□□□□ -1.75
CASQ1P31415 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.11□□□□□ -1.75
CASQ1P31415 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.11□□□□□ -1.75
CASQ1P31415 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.11□□□□□ -1.75
CASQ1P31415 MTND2P28-201ENST00000457540 1044 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CASQ1P31415 TRBV8-2-201ENST00000475637 270 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 AC084198.1-201ENST00000477747 402 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 PHBP14-201ENST00000512887 367 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.11□□□□□ -1.75
CASQ1P31415 AC093331.1-201ENST00000521474 169 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 IGHV3-76-201ENST00000522465 295 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 AC008489.1-201ENST00000524271 483 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.11□□□□□ -1.75
CASQ1P31415 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CASQ1P31415 AC010198.2-201ENST00000550612 259 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.11□□□□□ -1.75
CASQ1P31415 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.11□□□□□ -1.75
CASQ1P31415 MIR3690-201ENST00000580266 75 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.11□□□□□ -1.75
CASQ1P31415 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CASQ1P31415 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.11□□□□□ -1.75
CASQ1P31415 AC011492.1-201ENST00000600023 315 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.11□□□□□ -1.75
CASQ1P31415 AL137849.1-201ENST00000604767 169 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.11□□□□□ -1.75
CASQ1P31415 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CASQ1P31415 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms