Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC13P31276 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC13P31276 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.59□□□□□ -1.67
HOXC13P31276 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC13P31276 MTCYBP15-201ENST00000433123 1127 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AL132765.1-201ENST00000434165 553 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC13P31276 DHFRP3-201ENST00000455595 559 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC13P31276 RN7SL98P-201ENST00000462271 300 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 RPL37P6-202ENST00000464216 403 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC13P31276 AC022034.3-201ENST00000471393 478 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AC090013.1-201ENST00000485147 480 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC13P31276 RN7SL810P-201ENST00000493031 276 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AC093534.1-201ENST00000504977 132 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC13P31276 AC121161.1-201ENST00000510606 652 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AC112206.4-201ENST00000515142 405 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AP003730.1-201ENST00000524605 285 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 GLRXP2-201ENST00000555594 321 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC13P31276 ATP5F1P7-201ENST00000567330 760 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AC126323.6-202ENST00000568092 3511 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC13P31276 AC090337.1-201ENST00000579651 2074 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC13P31276 AC023043.4-201ENST00000612081 449 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 uc_338.32-201ENST00000615087 172 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 AC121761.2-201ENST00000617300 689 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC13P31276 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC13P31276 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC13P31276 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC13P31276 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC13P31276 AC138649.5-201ENST00000637456 137 ntBASIC4.59□□□□□ -1.67
HOXC13P31276 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC13P31276 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC13P31276 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC13P31276 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC13P31276 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC13P31276 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC13P31276 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
HOXC13P31276 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC13P31276 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC13P31276 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC13P31276 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC13P31276 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HOXC13P31276 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC13P31276 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC13P31276 SPRR2C-201ENST00000290702 219 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 RNU1-20P-201ENST00000363314 162 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HOXC13P31276 MIR195-201ENST00000385194 87 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 MIR670-201ENST00000390142 98 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HOXC13P31276 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC13P31276 AP002784.2-201ENST00000397300 549 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 AL445183.3-201ENST00000414168 502 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 SFR1P2-201ENST00000421841 730 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 HSFY7P-201ENST00000432672 318 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXC13P31276 HSFY8P-201ENST00000437934 318 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 GXYLT1P1-201ENST00000446657 490 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 HSFY5P-201ENST00000453726 309 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 DDX39BP2-208ENST00000453923 258 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 UQCRHP4-201ENST00000471686 272 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 TMED11P-201ENST00000479478 690 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC13P31276 AC108145.1-201ENST00000503770 153 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 IGHV3-32-201ENST00000519182 355 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXC13P31276 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC13P31276 AC090281.1-201ENST00000523019 276 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXC13P31276 AP000916.1-201ENST00000533869 835 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AL442163.2-201ENST00000553912 710 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC053481.3-201ENST00000577881 843 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 MIR4760-201ENST00000585040 80 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC015911.5-201ENST00000587076 451 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 CCDC58P3-201ENST00000590792 430 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC245389.1-201ENST00000605141 529 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC026741.1-201ENST00000605892 482 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC018754.1-201ENST00000607486 925 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 VN1R9P-201ENST00000614184 867 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 AC006133.1-201ENST00000617106 264 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 MIR3653-201ENST00000625572 110 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 OR8B1P-202ENST00000641132 1178 ntBASIC4.58□□□□□ -1.68
HOXC13P31276 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC13P31276 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms