Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.14□□□□□ -1.91
COL8A2P25067 RN7SKP56-201ENST00000410513 331 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 YME1L1P1-201ENST00000429435 297 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 RPS20P1-201ENST00000434853 354 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 HSPD1P21-201ENST00000436541 245 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 PPIAP17-201ENST00000438507 471 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.14□□□□□ -1.91
COL8A2P25067 AC239809.1-201ENST00000450470 217 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.14□□□□□ -1.91
COL8A2P25067 AC069277.2-201ENST00000454211 432 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 AC084198.1-201ENST00000477747 402 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 AC106707.2-201ENST00000484182 374 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 AC069499.1-201ENST00000489433 509 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.14□□□□□ -1.91
COL8A2P25067 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.14□□□□□ -1.91
COL8A2P25067 CBX3P5-201ENST00000552017 521 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.14□□□□□ -1.91
COL8A2P25067 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.14□□□□□ -1.91
COL8A2P25067 MIR3922-201ENST00000585192 84 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 AC020914.4-201ENST00000597690 277 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 AL592494.3-201ENST00000609485 464 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 uc_338.32-201ENST00000615087 172 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 AC244100.1-202ENST00000621554 382 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 AP006248.2-201ENST00000623309 592 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.14□□□□□ -1.91
COL8A2P25067 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.14□□□□□ -1.91
COL8A2P25067 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.14□□□□□ -1.91
COL8A2P25067 AC009093.8-201ENST00000641769 292 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL8A2P25067 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
COL8A2P25067 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL8A2P25067 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL8A2P25067 OR10AB1P-202ENST00000641219 1686 ntBASIC3.14□□□□□ -1.91
COL8A2P25067 AC083899.2-201ENST00000423285 1376 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 RNA5SP119-201ENST00000362715 117 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 RNA5SP424-201ENST00000390988 115 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AL138878.1-201ENST00000405131 347 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 RNA5SP239-201ENST00000410218 129 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 RPS3AP25-201ENST00000411660 793 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.13□□□□□ -1.91
COL8A2P25067 AC093084.1-201ENST00000424233 687 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 DPY19L1P2-201ENST00000426647 915 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AL050321.1-201ENST00000432363 400 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 HMGN2P31-201ENST00000432430 273 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 ATP5HP2-201ENST00000433885 485 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.13□□□□□ -1.91
COL8A2P25067 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.13□□□□□ -1.91
COL8A2P25067 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.13□□□□□ -1.91
COL8A2P25067 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.13□□□□□ -1.91
COL8A2P25067 RPL21P71-201ENST00000465598 459 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AC018635.1-201ENST00000468292 1030 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 RPL7L1P8-201ENST00000469911 741 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AC022034.3-201ENST00000471393 478 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.13□□□□□ -1.91
COL8A2P25067 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.13□□□□□ -1.91
COL8A2P25067 BTF3L4P4-201ENST00000506381 449 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AC147055.1-201ENST00000509261 750 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 CCNHP1-201ENST00000513311 678 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.13□□□□□ -1.91
COL8A2P25067 OR8I1P-201ENST00000529291 931 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AC008011.1-201ENST00000545989 227 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AC006960.3-201ENST00000561845 705 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AC009101.1-201ENST00000568135 242 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.13□□□□□ -1.91
COL8A2P25067 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.13□□□□□ -1.91
COL8A2P25067 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.13□□□□□ -1.91
COL8A2P25067 AC090953.1-201ENST00000604305 1092 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AL137849.1-201ENST00000604767 169 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 AC004777.1-201ENST00000624317 287 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 AC106871.1-201ENST00000568324 3102 ntBASIC3.13□□□□□ -1.91
COL8A2P25067 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
COL8A2P25067 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL8A2P25067 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
COL8A2P25067 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
COL8A2P25067 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
COL8A2P25067 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
COL8A2P25067 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
COL8A2P25067 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL8A2P25067 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
COL8A2P25067 RNU4-7P-201ENST00000364758 141 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL8A2P25067 RNU1-89P-201ENST00000384592 164 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AC245054.1-201ENST00000420944 258 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.12□□□□□ -1.91
COL8A2P25067 AL645931.1-201ENST00000439737 410 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 RPL6P5-201ENST00000445678 828 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 EXTL2P1-201ENST00000446218 416 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 RPS3AP46-201ENST00000448352 682 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms