Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
POLR2AP24928 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
POLR2AP24928 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
POLR2AP24928 MAPK10-328ENST00000641553 4009 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
POLR2AP24928 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
POLR2AP24928 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.19□□□□□ -1.58
POLR2AP24928 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
POLR2AP24928 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.19□□□□□ -1.58
POLR2AP24928 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.19□□□□□ -1.58
POLR2AP24928 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
POLR2AP24928 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
POLR2AP24928 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.19□□□□□ -1.58
POLR2AP24928 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
POLR2AP24928 RNU1-63P-201ENST00000383902 164 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 RNY3P14-201ENST00000384309 102 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 MT-TH-201ENST00000387441 69 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.19□□□□□ -1.58
POLR2AP24928 RPL7P58-201ENST00000402913 758 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 AC007738.1-201ENST00000413892 348 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.19□□□□□ -1.58
POLR2AP24928 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.19□□□□□ -1.58
POLR2AP24928 AL365203.2-201ENST00000423444 196 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 RPL7P2-201ENST00000427639 268 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 RPEP2-201ENST00000432149 701 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.19□□□□□ -1.58
POLR2AP24928 AL592437.1-201ENST00000443781 492 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 TPMTP4-201ENST00000450749 678 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 AC093899.1-201ENST00000457984 376 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.19□□□□□ -1.58
POLR2AP24928 RPL5P12-201ENST00000477071 851 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 RPS27AP13-201ENST00000498403 237 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
POLR2AP24928 RN7SKP141-201ENST00000516167 338 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 MTCYBP19-201ENST00000517463 1124 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.19□□□□□ -1.58
POLR2AP24928 AC092851.1-201ENST00000535964 478 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 MIR3912-201ENST00000577566 105 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 AC107075.1-201ENST00000613695 314 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.19□□□□□ -1.58
POLR2AP24928 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
POLR2AP24928 AC027228.2-201ENST00000567141 2154 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
POLR2AP24928 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.19□□□□□ -1.58
POLR2AP24928 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
POLR2AP24928 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
POLR2AP24928 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.19□□□□□ -1.58
POLR2AP24928 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
POLR2AP24928 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.19□□□□□ -1.58
POLR2AP24928 RLIMP1-201ENST00000339626 1680 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC073544.1-201ENST00000600110 1595 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 ZNF876P-202ENST00000398732 1485 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 RNU6-1251P-201ENST00000364502 107 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 RNA5SP372-201ENST00000390836 115 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC006960.1-201ENST00000419980 153 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.18□□□□□ -1.58
POLR2AP24928 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.18□□□□□ -1.58
POLR2AP24928 MTND1P32-201ENST00000433043 938 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AL590103.1-201ENST00000434488 307 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 FGF7P5-201ENST00000441829 291 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 AC233982.1-201ENST00000451247 436 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.18□□□□□ -1.58
POLR2AP24928 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC108145.1-201ENST00000503770 153 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.18□□□□□ -1.58
POLR2AP24928 RPL37P25-201ENST00000507308 276 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 RNA5SP519-201ENST00000516480 119 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 AC095057.3-201ENST00000567102 1157 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.18□□□□□ -1.58
POLR2AP24928 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.18□□□□□ -1.58
POLR2AP24928 AL031775.1-201ENST00000607014 887 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC109454.4-201ENST00000623411 649 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
POLR2AP24928 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 AL133243.3-201ENST00000617415 3004 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.18□□□□□ -1.58
POLR2AP24928 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.18□□□□□ -1.58
POLR2AP24928 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
POLR2AP24928 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.18□□□□□ -1.58
POLR2AP24928 Y_RNA.333-201ENST00000365274 102 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 SNORA11.2-201ENST00000408318 127 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC098592.2-201ENST00000413158 265 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.18□□□□□ -1.58
POLR2AP24928 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms