Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 MIR6500-201ENST00000622700 86 ntBASIC3.47□□□□□ -1.85
USF1P22415 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.47□□□□□ -1.85
USF1P22415 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
USF1P22415 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.47□□□□□ -1.85
USF1P22415 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USF1P22415 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USF1P22415 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.47□□□□□ -1.85
USF1P22415 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
USF1P22415 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
USF1P22415 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USF1P22415 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
USF1P22415 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.46□□□□□ -1.85
USF1P22415 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
USF1P22415 AC106871.1-201ENST00000568324 3102 ntBASIC3.46□□□□□ -1.85
USF1P22415 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
USF1P22415 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
USF1P22415 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
USF1P22415 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USF1P22415 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USF1P22415 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
USF1P22415 SNORD66.1-201ENST00000391230 76 ntBASIC3.46□□□□□ -1.86
USF1P22415 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.46□□□□□ -1.86
USF1P22415 TPT1P2-201ENST00000413105 503 ntBASIC3.46□□□□□ -1.86
USF1P22415 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USF1P22415 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.46□□□□□ -1.86
USF1P22415 AL031736.2-201ENST00000426573 787 ntBASIC3.46□□□□□ -1.86
USF1P22415 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.46□□□□□ -1.86
USF1P22415 AC006946.1-201ENST00000429106 328 ntBASIC3.46□□□□□ -1.86
USF1P22415 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.46□□□□□ -1.86
USF1P22415 MTND2P21-201ENST00000436242 1042 ntBASIC3.46□□□□□ -1.86
USF1P22415 ELOCP11-201ENST00000436690 332 ntBASIC3.46□□□□□ -1.86
USF1P22415 ELOCP16-201ENST00000444494 332 ntBASIC3.46□□□□□ -1.86
USF1P22415 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.46□□□□□ -1.86
USF1P22415 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.46□□□□□ -1.86
USF1P22415 AC091564.1-201ENST00000464563 479 ntBASIC3.46□□□□□ -1.86
USF1P22415 RPL7P1-201ENST00000468161 747 ntBASIC3.46□□□□□ -1.86
USF1P22415 RPL7P9-201ENST00000468715 747 ntBASIC3.46□□□□□ -1.86
USF1P22415 FTH1P24-201ENST00000503502 462 ntBASIC3.46□□□□□ -1.86
USF1P22415 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.46□□□□□ -1.86
USF1P22415 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.46□□□□□ -1.86
USF1P22415 AC017037.1-201ENST00000508460 471 ntBASIC3.46□□□□□ -1.86
USF1P22415 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.46□□□□□ -1.86
USF1P22415 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.46□□□□□ -1.86
USF1P22415 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.46□□□□□ -1.86
USF1P22415 UBTFL9-201ENST00000534504 1148 ntBASIC3.46□□□□□ -1.86
USF1P22415 AC092851.1-201ENST00000535964 478 ntBASIC3.46□□□□□ -1.86
USF1P22415 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.46□□□□□ -1.86
USF1P22415 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.46□□□□□ -1.86
USF1P22415 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.46□□□□□ -1.86
USF1P22415 HSPE1P5-201ENST00000561489 272 ntBASIC3.46□□□□□ -1.86
USF1P22415 AC053481.3-201ENST00000577881 843 ntBASIC3.46□□□□□ -1.86
USF1P22415 MIR4444-1-201ENST00000581696 74 ntBASIC3.46□□□□□ -1.86
USF1P22415 MIR4444-2-201ENST00000584390 74 ntBASIC3.46□□□□□ -1.86
USF1P22415 AC008739.3-201ENST00000603262 127 ntBASIC3.46□□□□□ -1.86
USF1P22415 SUMO2P14-201ENST00000604488 293 ntBASIC3.46□□□□□ -1.86
USF1P22415 MIR432-201ENST00000606207 94 ntBASIC3.46□□□□□ -1.86
USF1P22415 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.46□□□□□ -1.86
USF1P22415 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USF1P22415 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
USF1P22415 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
USF1P22415 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
USF1P22415 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
USF1P22415 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.46□□□□□ -1.86
USF1P22415 AC097504.1-201ENST00000515103 2415 ntBASIC3.45□□□□□ -1.86
USF1P22415 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
USF1P22415 DDX6P1-205ENST00000441966 1436 ntBASIC3.45□□□□□ -1.86
USF1P22415 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.45□□□□□ -1.86
USF1P22415 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
USF1P22415 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
USF1P22415 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
USF1P22415 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USF1P22415 XIAPP3-201ENST00000312918 795 ntBASIC3.45□□□□□ -1.86
USF1P22415 SNORA60-201ENST00000362396 134 ntBASIC3.45□□□□□ -1.86
USF1P22415 AC083799.1-201ENST00000366451 910 ntBASIC3.45□□□□□ -1.86
USF1P22415 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USF1P22415 AL590704.1-201ENST00000402856 794 ntBASIC3.45□□□□□ -1.86
USF1P22415 MIR1183-201ENST00000408856 89 ntBASIC3.45□□□□□ -1.86
USF1P22415 RNU4-6P-201ENST00000410804 122 ntBASIC3.45□□□□□ -1.86
USF1P22415 JKAMPP1-201ENST00000413804 919 ntBASIC3.45□□□□□ -1.86
USF1P22415 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.45□□□□□ -1.86
USF1P22415 AL691447.1-201ENST00000419456 387 ntBASIC3.45□□□□□ -1.86
USF1P22415 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.45□□□□□ -1.86
USF1P22415 AC093698.1-201ENST00000423843 571 ntBASIC3.45□□□□□ -1.86
USF1P22415 AL691449.1-201ENST00000426570 421 ntBASIC3.45□□□□□ -1.86
USF1P22415 YWHAEP5-201ENST00000431545 765 ntBASIC3.45□□□□□ -1.86
USF1P22415 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.45□□□□□ -1.86
USF1P22415 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.45□□□□□ -1.86
USF1P22415 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.45□□□□□ -1.86
USF1P22415 AL358232.1-201ENST00000448030 501 ntBASIC3.45□□□□□ -1.86
USF1P22415 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.45□□□□□ -1.86
USF1P22415 SNRPGP5-201ENST00000456003 220 ntBASIC3.45□□□□□ -1.86
USF1P22415 RPL37P3-201ENST00000456825 293 ntBASIC3.45□□□□□ -1.86
USF1P22415 AC007688.1-201ENST00000475592 759 ntBASIC3.45□□□□□ -1.86
USF1P22415 GAPDHP36-201ENST00000480688 918 ntBASIC3.45□□□□□ -1.86
USF1P22415 SYT14P1-201ENST00000481459 721 ntBASIC3.45□□□□□ -1.86
USF1P22415 HMGB1P21-201ENST00000502313 581 ntBASIC3.45□□□□□ -1.86
USF1P22415 OR5H4P-201ENST00000510851 923 ntBASIC3.45□□□□□ -1.86
USF1P22415 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.45□□□□□ -1.86
USF1P22415 RNA5SP143-201ENST00000516936 115 ntBASIC3.45□□□□□ -1.86
USF1P22415 IGKV2-36-201ENST00000519999 223 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms