Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFRAP16234 VN1R88P-201ENST00000596787 292 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 AC083899.3-201ENST00000603413 594 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 BNIP3P4-201ENST00000604946 565 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 MIR432-201ENST00000606207 94 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFRAP16234 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.43□□□□□ -1.7
PDGFRAP16234 AL445567.2-201ENST00000618935 498 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFRAP16234 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFRAP16234 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PDGFRAP16234 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFRAP16234 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFRAP16234 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFRAP16234 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFRAP16234 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PDGFRAP16234 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFRAP16234 MIR525-201ENST00000384978 85 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 DNAJC19P6-201ENST00000401853 280 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 LAP3P1-201ENST00000403648 294 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.42□□□□□ -1.7
PDGFRAP16234 RN7SKP177-201ENST00000410567 355 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFRAP16234 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.42□□□□□ -1.7
PDGFRAP16234 AC105402.2-201ENST00000438503 358 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 RPL23AP89-201ENST00000439324 255 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFRAP16234 AC008280.2-201ENST00000455473 307 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFRAP16234 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFRAP16234 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFRAP16234 RPL21P18-201ENST00000469899 480 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFRAP16234 MTATP6P22-201ENST00000507369 598 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AC112206.4-201ENST00000515142 405 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 SNORA31.9-201ENST00000516429 84 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFRAP16234 AL442163.2-201ENST00000553912 710 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.42□□□□□ -1.7
PDGFRAP16234 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFRAP16234 AC005014.3-201ENST00000605985 190 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AL031666.3-201ENST00000609320 1006 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFRAP16234 MIR3653-201ENST00000625572 110 ntBASIC4.42□□□□□ -1.7
PDGFRAP16234 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFRAP16234 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
PDGFRAP16234 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFRAP16234 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFRAP16234 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFRAP16234 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFRAP16234 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFRAP16234 AC005261.4-201ENST00000600047 1385 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.41□□□□□ -1.7
PDGFRAP16234 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFRAP16234 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PDGFRAP16234 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFRAP16234 MFSD8-220ENST00000641243 1422 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.41□□□□□ -1.7
PDGFRAP16234 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFRAP16234 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.41□□□□□ -1.7
PDGFRAP16234 MIR383-201ENST00000362257 73 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFRAP16234 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.41□□□□□ -1.7
PDGFRAP16234 AL355615.1-201ENST00000406187 641 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.41□□□□□ -1.7
PDGFRAP16234 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFRAP16234 OR2X1P-201ENST00000421144 687 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 AC241520.1-201ENST00000422654 1099 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 RPL7P4-203ENST00000430239 730 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 RPL37P1-201ENST00000432310 284 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFRAP16234 MTND1P33-201ENST00000446251 917 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 AC009963.2-201ENST00000453431 138 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 BX248409.1-201ENST00000455497 255 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 HMGB1P21-201ENST00000502313 581 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 NAMPTP2-201ENST00000505629 1115 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 AC008885.2-201ENST00000509506 930 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 AC006499.6-201ENST00000511169 607 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.41□□□□□ -1.7
PDGFRAP16234 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFRAP16234 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.41□□□□□ -1.7
PDGFRAP16234 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.41□□□□□ -1.7
PDGFRAP16234 AC124293.1-201ENST00000530034 493 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.41□□□□□ -1.7
PDGFRAP16234 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.41□□□□□ -1.7
PDGFRAP16234 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFRAP16234 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFRAP16234 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFRAP16234 AC136624.4-201ENST00000573044 370 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 MIR4789-201ENST00000577469 82 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFRAP16234 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.41□□□□□ -1.7
PDGFRAP16234 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.41□□□□□ -1.7
PDGFRAP16234 AL138960.2-201ENST00000625145 535 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PDGFRAP16234 AL136520.1-201ENST00000600311 1322 ntBASIC4.41□□□□□ -1.7
PDGFRAP16234 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms