Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RNU6-589P-201ENST00000516485 107 ntBASIC8.11□□□□□ -1.11
CD44P16070 RNU6-64P-201ENST00000517119 105 ntBASIC8.11□□□□□ -1.11
CD44P16070 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.11□□□□□ -1.11
CD44P16070 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CD44P16070 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.11□□□□□ -1.11
CD44P16070 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.11□□□□□ -1.11
CD44P16070 AC017100.2-201ENST00000584628 355 ntBASIC8.11□□□□□ -1.11
CD44P16070 AC010463.3-201ENST00000594077 500 ntBASIC8.11□□□□□ -1.11
CD44P16070 AL160281.1-201ENST00000605307 311 ntBASIC8.11□□□□□ -1.11
CD44P16070 AC073349.3-201ENST00000617616 186 ntBASIC8.11□□□□□ -1.11
CD44P16070 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.11□□□□□ -1.11
CD44P16070 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC8.11□□□□□ -1.11
CD44P16070 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.11□□□□□ -1.11
CD44P16070 AC000374.1-201ENST00000434698 1745 ntBASIC8.11□□□□□ -1.11
CD44P16070 DDX50P1-201ENST00000438163 2400 ntBASIC8.11□□□□□ -1.11
CD44P16070 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC8.11□□□□□ -1.11
CD44P16070 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CD44P16070 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 FER-202ENST00000438717 1531 ntTSL 2 BASIC8.1□□□□□ -1.11
CD44P16070 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 AL080312.1-201ENST00000256654 824 ntBASIC8.1□□□□□ -1.11
CD44P16070 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 RNU6-312P-201ENST00000364629 107 ntBASIC8.1□□□□□ -1.11
CD44P16070 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC8.1□□□□□ -1.11
CD44P16070 SNORA3.1-201ENST00000408166 111 ntBASIC8.1□□□□□ -1.11
CD44P16070 RNU2-6P-201ENST00000411404 190 ntBASIC8.1□□□□□ -1.11
CD44P16070 AL355862.1-201ENST00000412705 353 ntBASIC8.1□□□□□ -1.11
CD44P16070 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.1□□□□□ -1.11
CD44P16070 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC8.1□□□□□ -1.11
CD44P16070 OR4F2P-201ENST00000424047 938 ntBASIC8.1□□□□□ -1.11
CD44P16070 AL590233.1-201ENST00000430017 456 ntBASIC8.1□□□□□ -1.11
CD44P16070 AL512844.2-201ENST00000433990 593 ntBASIC8.1□□□□□ -1.11
CD44P16070 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.1□□□□□ -1.11
CD44P16070 AC018475.1-201ENST00000478358 465 ntBASIC8.1□□□□□ -1.11
CD44P16070 RN7SL549P-201ENST00000478997 282 ntBASIC8.1□□□□□ -1.11
CD44P16070 RPS4XP22-201ENST00000480755 780 ntBASIC8.1□□□□□ -1.11
CD44P16070 OR9A1P-202ENST00000484361 945 ntBASIC8.1□□□□□ -1.11
CD44P16070 RN7SL445P-201ENST00000495609 293 ntBASIC8.1□□□□□ -1.11
CD44P16070 AC093853.1-201ENST00000515689 483 ntBASIC8.1□□□□□ -1.11
CD44P16070 RNU4ATAC15P-201ENST00000516415 126 ntBASIC8.1□□□□□ -1.11
CD44P16070 AC120036.3-201ENST00000517826 292 ntBASIC8.1□□□□□ -1.11
CD44P16070 RPL10P18-201ENST00000519384 309 ntBASIC8.1□□□□□ -1.11
CD44P16070 IGLVI-42-201ENST00000522485 381 ntBASIC8.1□□□□□ -1.11
CD44P16070 OLR1-210ENST00000544577 924 ntTSL 5 BASIC8.1□□□□□ -1.11
CD44P16070 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC8.1□□□□□ -1.11
CD44P16070 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC8.1□□□□□ -1.11
CD44P16070 RPL23AP84-201ENST00000571193 464 ntBASIC8.1□□□□□ -1.11
CD44P16070 CPDP1-201ENST00000579660 283 ntBASIC8.1□□□□□ -1.11
CD44P16070 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC8.1□□□□□ -1.11
CD44P16070 CUX2P1-201ENST00000606426 298 ntBASIC8.1□□□□□ -1.11
CD44P16070 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC8.1□□□□□ -1.11
CD44P16070 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.1□□□□□ -1.11
CD44P16070 AC006335.3-201ENST00000613408 292 ntBASIC8.1□□□□□ -1.11
CD44P16070 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.1□□□□□ -1.11
CD44P16070 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.1□□□□□ -1.11
CD44P16070 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
CD44P16070 OR6M2P-202ENST00000641780 2063 ntBASIC8.1□□□□□ -1.11
CD44P16070 PAPPA-AS1-201ENST00000445861 2450 ntBASIC8.1□□□□□ -1.11
CD44P16070 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.1□□□□□ -1.11
CD44P16070 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CD44P16070 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 ZNF299P-201ENST00000406845 1804 ntBASIC8.1□□□□□ -1.11
CD44P16070 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.1□□□□□ -1.11
CD44P16070 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CD44P16070 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.09□□□□□ -1.11
CD44P16070 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CD44P16070 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CD44P16070 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC8.09□□□□□ -1.11
CD44P16070 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CD44P16070 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.09□□□□□ -1.11
CD44P16070 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
CD44P16070 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CD44P16070 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CD44P16070 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC8.09□□□□□ -1.11
CD44P16070 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.09□□□□□ -1.11
CD44P16070 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.09□□□□□ -1.11
CD44P16070 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC8.09□□□□□ -1.11
CD44P16070 RNA5SP258-201ENST00000362750 119 ntBASIC8.09□□□□□ -1.11
CD44P16070 Y_RNA.357-201ENST00000365487 109 ntBASIC8.09□□□□□ -1.11
CD44P16070 RNU6-1144P-201ENST00000384247 104 ntBASIC8.09□□□□□ -1.11
CD44P16070 AL513475.1-201ENST00000406602 315 ntBASIC8.09□□□□□ -1.11
CD44P16070 RPL30P13-201ENST00000418873 348 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms