Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VCANP13611 AC010401.2-201ENST00000575137 4934 ntBASIC3.48□□□□□ -1.85
VCANP13611 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.48□□□□□ -1.85
VCANP13611 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.48□□□□□ -1.85
VCANP13611 RN7SKP111-201ENST00000410349 271 ntBASIC3.48□□□□□ -1.85
VCANP13611 AL353678.1-201ENST00000422735 741 ntBASIC3.48□□□□□ -1.85
VCANP13611 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.48□□□□□ -1.85
VCANP13611 RPL23AP23-201ENST00000452590 471 ntBASIC3.48□□□□□ -1.85
VCANP13611 RPS27AP9-201ENST00000477681 438 ntBASIC3.48□□□□□ -1.85
VCANP13611 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.48□□□□□ -1.85
VCANP13611 AC234778.2-201ENST00000566241 354 ntBASIC3.48□□□□□ -1.85
VCANP13611 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.48□□□□□ -1.85
VCANP13611 ELOCP29-201ENST00000588193 334 ntBASIC3.48□□□□□ -1.85
VCANP13611 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.48□□□□□ -1.85
VCANP13611 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
VCANP13611 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VCANP13611 AL355596.1-201ENST00000565399 3996 ntBASIC3.47□□□□□ -1.85
VCANP13611 MIR1289-2-201ENST00000408360 111 ntBASIC3.47□□□□□ -1.85
VCANP13611 MRPL50P2-201ENST00000416821 482 ntBASIC3.47□□□□□ -1.85
VCANP13611 OR51A6P-201ENST00000418680 1004 ntBASIC3.47□□□□□ -1.85
VCANP13611 AC004448.2-201ENST00000422360 586 ntBASIC3.47□□□□□ -1.85
VCANP13611 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.47□□□□□ -1.85
VCANP13611 RN7SL20P-201ENST00000488827 297 ntBASIC3.47□□□□□ -1.85
VCANP13611 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.47□□□□□ -1.85
VCANP13611 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.47□□□□□ -1.85
VCANP13611 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.47□□□□□ -1.85
VCANP13611 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.47□□□□□ -1.85
VCANP13611 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.47□□□□□ -1.85
VCANP13611 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.47□□□□□ -1.85
VCANP13611 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VCANP13611 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VCANP13611 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
VCANP13611 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.47□□□□□ -1.85
VCANP13611 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
VCANP13611 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.47□□□□□ -1.85
VCANP13611 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VCANP13611 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
VCANP13611 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC3.47□□□□□ -1.85
VCANP13611 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.47□□□□□ -1.85
VCANP13611 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VCANP13611 AL672167.1-206ENST00000356293 943 ntBASIC3.47□□□□□ -1.85
VCANP13611 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VCANP13611 HLFP1-201ENST00000402375 499 ntBASIC3.47□□□□□ -1.85
VCANP13611 AC021205.1-201ENST00000468797 348 ntBASIC3.47□□□□□ -1.85
VCANP13611 HSPE1P6-201ENST00000479457 291 ntBASIC3.47□□□□□ -1.85
VCANP13611 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.47□□□□□ -1.85
VCANP13611 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VCANP13611 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
VCANP13611 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC3.46□□□□□ -1.85
VCANP13611 MIR512-1-201ENST00000384913 84 ntBASIC3.46□□□□□ -1.85
VCANP13611 RPL7AP73-201ENST00000413490 353 ntBASIC3.46□□□□□ -1.85
VCANP13611 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
VCANP13611 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.46□□□□□ -1.85
VCANP13611 NECAP1P2-201ENST00000455668 727 ntBASIC3.46□□□□□ -1.85
VCANP13611 AC078785.3-201ENST00000476607 425 ntBASIC3.46□□□□□ -1.85
VCANP13611 AP002404.1-201ENST00000532005 451 ntBASIC3.46□□□□□ -1.85
VCANP13611 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.46□□□□□ -1.85
VCANP13611 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.46□□□□□ -1.85
VCANP13611 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC3.46□□□□□ -1.86
VCANP13611 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC3.46□□□□□ -1.86
VCANP13611 Z95327.2-201ENST00000414579 1873 ntBASIC3.46□□□□□ -1.86
VCANP13611 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VCANP13611 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VCANP13611 SNORA9.2-201ENST00000365361 133 ntBASIC3.46□□□□□ -1.86
VCANP13611 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.46□□□□□ -1.86
VCANP13611 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.46□□□□□ -1.86
VCANP13611 HMGB1P3-201ENST00000502802 616 ntBASIC3.46□□□□□ -1.86
VCANP13611 AC110794.1-201ENST00000505816 425 ntBASIC3.46□□□□□ -1.86
VCANP13611 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.46□□□□□ -1.86
VCANP13611 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.46□□□□□ -1.86
VCANP13611 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VCANP13611 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VCANP13611 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.46□□□□□ -1.86
VCANP13611 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VCANP13611 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
VCANP13611 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VCANP13611 RNU1-18P-201ENST00000363062 164 ntBASIC3.46□□□□□ -1.86
VCANP13611 RNU6-548P-201ENST00000517083 115 ntBASIC3.46□□□□□ -1.86
VCANP13611 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.46□□□□□ -1.86
VCANP13611 AL158827.2-201ENST00000602494 330 ntBASIC3.46□□□□□ -1.86
VCANP13611 AC100793.4-201ENST00000613683 429 ntBASIC3.46□□□□□ -1.86
VCANP13611 AL691447.3-201ENST00000635020 330 ntBASIC3.46□□□□□ -1.86
VCANP13611 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VCANP13611 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VCANP13611 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VCANP13611 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.45□□□□□ -1.86
VCANP13611 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.45□□□□□ -1.86
VCANP13611 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.45□□□□□ -1.86
VCANP13611 AC093156.1-201ENST00000440382 670 ntBASIC3.45□□□□□ -1.86
VCANP13611 AL357552.1-201ENST00000445254 415 ntBASIC3.45□□□□□ -1.86
VCANP13611 AC100770.1-201ENST00000532310 322 ntBASIC3.45□□□□□ -1.86
VCANP13611 LSM3P2-201ENST00000551246 273 ntBASIC3.45□□□□□ -1.86
VCANP13611 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.45□□□□□ -1.86
VCANP13611 AC016727.1-205ENST00000605437 569 ntBASIC3.45□□□□□ -1.86
VCANP13611 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VCANP13611 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VCANP13611 AC003985.2-201ENST00000562268 1669 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms