Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 IGBP1P4-201ENST00000503202 879 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC114981.1-201ENST00000503897 678 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.42□□□□□ -1.54
COL6A2P12110 FAM92A1P2-202ENST00000504766 877 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC108064.1-201ENST00000513791 460 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 HMGN1P9-201ENST00000515212 298 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.42□□□□□ -1.54
COL6A2P12110 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL6A2P12110 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.42□□□□□ -1.54
COL6A2P12110 AL390334.1-201ENST00000556395 450 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 RN7SL753P-201ENST00000581238 290 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC006272.2-201ENST00000594725 163 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC008687.2-201ENST00000597865 520 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 AC112191.3-201ENST00000604371 277 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 AC103710.4-201ENST00000609301 899 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC017083.3-201ENST00000609955 700 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AL592295.2-201ENST00000612578 206 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.42□□□□□ -1.54
COL6A2P12110 AC104010.1-201ENST00000616889 150 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.42□□□□□ -1.54
COL6A2P12110 AC136475.10-201ENST00000620253 385 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AC092794.2-201ENST00000620933 563 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.42□□□□□ -1.54
COL6A2P12110 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.42□□□□□ -1.54
COL6A2P12110 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
COL6A2P12110 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
COL6A2P12110 AC021242.1-201ENST00000507315 2035 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 MIR375-201ENST00000362103 64 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 Y_RNA.9-201ENST00000362354 101 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 RN7SKP6-201ENST00000364795 319 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 RNU6-114P-201ENST00000384704 105 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 U8.14-201ENST00000390843 143 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC004386.1-201ENST00000393214 761 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC005522.1-201ENST00000395416 346 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 HMGB1P17-201ENST00000403495 628 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 AC008280.1-201ENST00000418851 412 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC127526.2-201ENST00000426436 775 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 TIMM9P3-201ENST00000428659 274 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 RPL12P17-201ENST00000432393 498 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 AC010881.1-201ENST00000433830 235 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 RPL7P11-201ENST00000437586 658 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.41□□□□□ -1.54
COL6A2P12110 GDI2P2-201ENST00000445131 608 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 MTCO1P48-201ENST00000448024 1096 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 MEMO1P3-201ENST00000459811 302 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 NDUFB4P2-201ENST00000509515 391 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AF131216.2-201ENST00000512316 564 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.41□□□□□ -1.54
COL6A2P12110 RNU6-615P-201ENST00000516065 106 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 RNU6-150P-201ENST00000516237 95 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 RNU6-430P-201ENST00000517078 107 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC022360.1-201ENST00000521058 340 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.41□□□□□ -1.54
COL6A2P12110 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.41□□□□□ -1.54
COL6A2P12110 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms