Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PSMC1P13-201ENST00000458195 985 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.64□□□□□ -1.51
SNRPA1P09661 MTND4LP3-201ENST00000468320 276 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC090602.1-201ENST00000469695 252 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.64□□□□□ -1.51
SNRPA1P09661 RPL35P6-201ENST00000490024 372 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 RN7SL812P-201ENST00000493791 279 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC084024.2-201ENST00000503480 791 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 MTND4P2-201ENST00000507767 1203 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC113347.3-201ENST00000509113 148 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC008958.1-201ENST00000511047 682 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 IGHV3-63-201ENST00000518422 341 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.64□□□□□ -1.51
SNRPA1P09661 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.64□□□□□ -1.51
SNRPA1P09661 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.64□□□□□ -1.51
SNRPA1P09661 ATP5F1P7-201ENST00000567330 760 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC022069.1-201ENST00000582910 658 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.64□□□□□ -1.51
SNRPA1P09661 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.64□□□□□ -1.51
SNRPA1P09661 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC105129.3-201ENST00000605455 485 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 VN1R74P-201ENST00000613259 503 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC105227.2-201ENST00000615075 605 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC022893.2-201ENST00000564832 3296 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.64□□□□□ -1.51
SNRPA1P09661 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SNRPA1P09661 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.64□□□□□ -1.51
SNRPA1P09661 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.64□□□□□ -1.51
SNRPA1P09661 MAPK10-304ENST00000641341 3984 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC010300.1-201ENST00000600671 5134 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SNRPA1P09661 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
SNRPA1P09661 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
SNRPA1P09661 Y_RNA.201-201ENST00000364052 96 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
SNRPA1P09661 ATP5F1P3-201ENST00000397213 657 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AL161909.1-201ENST00000397390 712 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AL138880.1-201ENST00000405824 642 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 RNA5SP317-201ENST00000410176 116 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 RNA5SP311-201ENST00000411290 116 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 VTA1P1-201ENST00000414044 866 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.63□□□□□ -1.51
SNRPA1P09661 TIMM9P2-201ENST00000419324 266 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 RPL23AP38-201ENST00000423801 469 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 MTND4P20-201ENST00000424125 869 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AL593851.1-201ENST00000426171 157 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AL035407.1-201ENST00000429211 571 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AC007327.1-201ENST00000447461 264 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.63□□□□□ -1.51
SNRPA1P09661 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.63□□□□□ -1.51
SNRPA1P09661 CDC42P1-201ENST00000456658 548 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC108734.3-201ENST00000481241 1165 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.63□□□□□ -1.51
SNRPA1P09661 ATP1B1P1-201ENST00000509767 915 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 RNA5SP446-201ENST00000515955 82 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 RNA5SP315-201ENST00000516340 116 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 RNA5SP312-201ENST00000517068 116 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 MIR2116-201ENST00000517221 80 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AC010198.2-201ENST00000550612 259 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AADACP1-206ENST00000561502 1193 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.63□□□□□ -1.51
SNRPA1P09661 DPRXP4-201ENST00000578053 568 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 HMGB2P1-201ENST00000591146 634 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.63□□□□□ -1.51
SNRPA1P09661 AL591034.3-201ENST00000605511 685 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC124312.4-201ENST00000605533 310 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC008966.2-201ENST00000606157 453 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC135507.1-201ENST00000607214 561 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC024941.1-201ENST00000612250 334 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC107075.1-201ENST00000613695 314 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AL354976.1-201ENST00000613843 387 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 VN1R7P-201ENST00000619242 903 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 MIR8059-201ENST00000620427 81 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 AC073530.2-201ENST00000623987 261 ntBASIC5.63□□□□□ -1.51
SNRPA1P09661 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.63□□□□□ -1.51
SNRPA1P09661 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SNRPA1P09661 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNRPA1P09661 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SNRPA1P09661 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms