Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.36□□□□□ -1.71
VTNP04004 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.36□□□□□ -1.71
VTNP04004 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.36□□□□□ -1.71
VTNP04004 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.36□□□□□ -1.71
VTNP04004 YWHAZP1-201ENST00000556286 722 ntBASIC4.36□□□□□ -1.71
VTNP04004 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.36□□□□□ -1.71
VTNP04004 AC090666.1-201ENST00000578241 445 ntBASIC4.36□□□□□ -1.71
VTNP04004 AL031666.3-201ENST00000609320 1006 ntBASIC4.36□□□□□ -1.71
VTNP04004 AC245100.7-201ENST00000609678 442 ntBASIC4.36□□□□□ -1.71
VTNP04004 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.36□□□□□ -1.71
VTNP04004 AL121772.2-201ENST00000614331 297 ntBASIC4.36□□□□□ -1.71
VTNP04004 AC011472.4-201ENST00000615848 491 ntBASIC4.36□□□□□ -1.71
VTNP04004 AC010608.3-201ENST00000625048 527 ntBASIC4.36□□□□□ -1.71
VTNP04004 AC004808.1-201ENST00000627671 721 ntBASIC4.36□□□□□ -1.71
VTNP04004 AC099654.8-201ENST00000637757 681 ntBASIC4.36□□□□□ -1.71
VTNP04004 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VTNP04004 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VTNP04004 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
VTNP04004 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VTNP04004 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.36□□□□□ -1.71
VTNP04004 AP002001.2-201ENST00000529025 1469 ntBASIC4.36□□□□□ -1.71
VTNP04004 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.36□□□□□ -1.71
VTNP04004 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VTNP04004 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VTNP04004 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.36□□□□□ -1.71
VTNP04004 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 AC027290.2-201ENST00000623210 18662 ntBASIC4.35□□□□□ -1.71
VTNP04004 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
VTNP04004 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 LINC01355-201ENST00000566551 5444 ntBASIC4.35□□□□□ -1.71
VTNP04004 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.35□□□□□ -1.71
VTNP04004 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 OR4A15-201ENST00000314706 1035 ntBASIC4.35□□□□□ -1.71
VTNP04004 IL6STP1-201ENST00000346911 1020 ntBASIC4.35□□□□□ -1.71
VTNP04004 RNA5SP171-201ENST00000391071 115 ntBASIC4.35□□□□□ -1.71
VTNP04004 NCSTNP1-201ENST00000406229 144 ntBASIC4.35□□□□□ -1.71
VTNP04004 AL024507.1-201ENST00000412741 274 ntBASIC4.35□□□□□ -1.71
VTNP04004 AC008173.1-201ENST00000418901 264 ntBASIC4.35□□□□□ -1.71
VTNP04004 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.35□□□□□ -1.71
VTNP04004 AC018644.1-201ENST00000429934 551 ntBASIC4.35□□□□□ -1.71
VTNP04004 AL035458.1-201ENST00000433096 585 ntBASIC4.35□□□□□ -1.71
VTNP04004 AL035246.1-201ENST00000433554 1255 ntBASIC4.35□□□□□ -1.71
VTNP04004 HLA-N-201ENST00000437516 135 ntBASIC4.35□□□□□ -1.71
VTNP04004 AL645638.1-201ENST00000440519 361 ntBASIC4.35□□□□□ -1.71
VTNP04004 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.35□□□□□ -1.71
VTNP04004 HMGB1P26-201ENST00000452520 628 ntBASIC4.35□□□□□ -1.71
VTNP04004 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.35□□□□□ -1.71
VTNP04004 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.35□□□□□ -1.71
VTNP04004 RPL21P47-201ENST00000483696 477 ntBASIC4.35□□□□□ -1.71
VTNP04004 RPS3AP6-201ENST00000484430 795 ntBASIC4.35□□□□□ -1.71
VTNP04004 AC025459.1-201ENST00000504072 156 ntBASIC4.35□□□□□ -1.71
VTNP04004 TCP11X3P-202ENST00000514289 1254 ntBASIC4.35□□□□□ -1.71
VTNP04004 AC093853.1-201ENST00000515689 483 ntBASIC4.35□□□□□ -1.71
VTNP04004 SNORA31.13-201ENST00000516624 135 ntBASIC4.35□□□□□ -1.71
VTNP04004 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.35□□□□□ -1.71
VTNP04004 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.35□□□□□ -1.71
VTNP04004 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.35□□□□□ -1.71
VTNP04004 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.35□□□□□ -1.71
VTNP04004 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.35□□□□□ -1.71
VTNP04004 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.35□□□□□ -1.71
VTNP04004 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.35□□□□□ -1.71
VTNP04004 AC068714.1-201ENST00000559623 800 ntBASIC4.35□□□□□ -1.71
VTNP04004 AC022884.3-201ENST00000579571 248 ntBASIC4.35□□□□□ -1.71
VTNP04004 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.35□□□□□ -1.71
VTNP04004 AC112230.1-201ENST00000604342 547 ntBASIC4.35□□□□□ -1.71
VTNP04004 AC008759.3-201ENST00000613300 508 ntBASIC4.35□□□□□ -1.71
VTNP04004 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.35□□□□□ -1.71
VTNP04004 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.35□□□□□ -1.71
VTNP04004 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.35□□□□□ -1.71
VTNP04004 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
VTNP04004 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 AC100871.1-201ENST00000507871 1456 ntBASIC4.35□□□□□ -1.71
VTNP04004 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
VTNP04004 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VTNP04004 HSPD1P11-201ENST00000508643 1702 ntBASIC4.35□□□□□ -1.71
VTNP04004 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.35□□□□□ -1.71
VTNP04004 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.35□□□□□ -1.71
VTNP04004 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VTNP04004 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.34□□□□□ -1.71
VTNP04004 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.34□□□□□ -1.71
VTNP04004 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VTNP04004 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VTNP04004 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VTNP04004 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VTNP04004 RNU6-354P-201ENST00000383862 107 ntBASIC4.34□□□□□ -1.71
VTNP04004 RNU6-610P-201ENST00000384264 107 ntBASIC4.34□□□□□ -1.71
VTNP04004 RN7SKP156-201ENST00000410308 342 ntBASIC4.34□□□□□ -1.71
VTNP04004 AL158825.1-201ENST00000414735 521 ntBASIC4.34□□□□□ -1.71
VTNP04004 AC048351.1-201ENST00000420064 602 ntBASIC4.34□□□□□ -1.71
VTNP04004 PNRC2P1-201ENST00000423940 420 ntBASIC4.34□□□□□ -1.71
VTNP04004 FO393414.1-201ENST00000428697 1184 ntBASIC4.34□□□□□ -1.71
VTNP04004 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.34□□□□□ -1.71
VTNP04004 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms