Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.15□□□□□ -1.75
CLPTM1O96005 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.15□□□□□ -1.75
CLPTM1O96005 PPIAP17-201ENST00000438507 471 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 OR1H1P-201ENST00000448731 937 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.15□□□□□ -1.75
CLPTM1O96005 ZNF886P-201ENST00000450781 723 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 SNRPGP5-201ENST00000456003 220 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.15□□□□□ -1.75
CLPTM1O96005 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.15□□□□□ -1.75
CLPTM1O96005 RPL21P131-201ENST00000497298 483 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 AC108471.1-201ENST00000513977 287 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 AC104417.1-201ENST00000523974 751 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.15□□□□□ -1.75
CLPTM1O96005 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.15□□□□□ -1.75
CLPTM1O96005 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.15□□□□□ -1.75
CLPTM1O96005 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLPTM1O96005 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.15□□□□□ -1.75
CLPTM1O96005 ATP5F1P7-201ENST00000567330 760 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 MIR3667-201ENST00000581025 74 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLPTM1O96005 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.15□□□□□ -1.75
CLPTM1O96005 AC013468.1-201ENST00000608680 598 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 AC048344.4-201ENST00000619744 527 ntBASIC4.15□□□□□ -1.75
CLPTM1O96005 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.15□□□□□ -1.75
CLPTM1O96005 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLPTM1O96005 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLPTM1O96005 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLPTM1O96005 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
CLPTM1O96005 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 AL118496.1-201ENST00000440201 1812 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CLPTM1O96005 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 NCLP2-201ENST00000416078 1462 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 FAM3C2-201ENST00000312214 681 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC007685.1-201ENST00000329806 452 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 Y_RNA.472-201ENST00000384322 102 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 SNORD116-12-201ENST00000384468 92 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CLPTM1O96005 TAS2R15P-201ENST00000390674 928 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 RNU6-1242P-201ENST00000391052 103 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AP000357.1-201ENST00000409926 1165 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.14□□□□□ -1.75
CLPTM1O96005 RNA5SP113-201ENST00000410486 84 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC048351.1-201ENST00000420064 602 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC005005.2-201ENST00000420779 380 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 C1DP1-201ENST00000426049 402 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.14□□□□□ -1.75
CLPTM1O96005 FTH1P16-201ENST00000435241 552 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AF228730.2-201ENST00000438784 848 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 VN1R25P-201ENST00000443385 738 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.14□□□□□ -1.75
CLPTM1O96005 DDX39BP2-208ENST00000453923 258 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 RPL7P32-201ENST00000457119 744 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC096992.1-201ENST00000459808 709 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC098799.3-201ENST00000506095 438 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.14□□□□□ -1.75
CLPTM1O96005 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC092851.1-201ENST00000535964 478 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 TOMM20P2-201ENST00000540082 421 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC133555.2-201ENST00000550213 292 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.14□□□□□ -1.75
CLPTM1O96005 AC141257.3-201ENST00000572906 215 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.14□□□□□ -1.75
CLPTM1O96005 MIR4737-201ENST00000583979 81 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC022726.1-201ENST00000587475 207 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 GAS5-AS1-201ENST00000602767 694 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC113368.1-201ENST00000603736 382 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.14□□□□□ -1.75
CLPTM1O96005 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLPTM1O96005 FAM27B-201ENST00000610601 213 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AL355493.4-201ENST00000618530 292 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC123767.1-202ENST00000620407 817 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC011330.2-201ENST00000621680 635 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC007342.8-201ENST00000623278 678 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AP002791.1-201ENST00000623291 381 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC007546.2-201ENST00000623996 360 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 AC008785.1-201ENST00000624475 456 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 CR381572.2-201ENST00000624852 397 ntBASIC4.14□□□□□ -1.75
CLPTM1O96005 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.14□□□□□ -1.75
CLPTM1O96005 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms