Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 SALL4P2-201ENST00000423288 2910 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF3O43395 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF3O43395 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF3O43395 ZNF37BP-203ENST00000452306 1352 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF3O43395 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PRPF3O43395 AC010928.1-201ENST00000592477 1447 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF3O43395 AL022322.2-201ENST00000624072 20397 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AL031595.2-201ENST00000624215 19071 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PRPF3O43395 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF3O43395 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF3O43395 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF3O43395 RN7SKP224-201ENST00000364140 325 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF3O43395 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF3O43395 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF3O43395 AL161449.1-201ENST00000414531 1199 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 LUZP4P1-201ENST00000415420 344 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF3O43395 AC092634.6-201ENST00000418558 192 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AC009237.2-201ENST00000421358 284 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 MTND4P20-201ENST00000424125 869 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 RPL31P54-201ENST00000429803 370 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF3O43395 FGF7P5-201ENST00000441829 291 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF3O43395 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF3O43395 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF3O43395 MTND2P19-201ENST00000449129 1012 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF3O43395 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF3O43395 OR5H4P-201ENST00000510851 923 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AC010587.2-201ENST00000511727 448 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF3O43395 RN7SKP31-201ENST00000516354 278 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF3O43395 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF3O43395 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF3O43395 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF3O43395 AC063949.1-201ENST00000552900 865 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF3O43395 HIGD1AP17-201ENST00000554576 276 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF3O43395 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF3O43395 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.41□□□□□ -1.54
PRPF3O43395 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF3O43395 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF3O43395 AL450489.1-201ENST00000612071 468 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF3O43395 AC069209.1-201ENST00000619282 651 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AC022106.2-201ENST00000620114 757 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 AL359757.1-201ENST00000623176 255 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF3O43395 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF3O43395 MAPK10-263ENST00000641052 4307 ntBASIC5.41□□□□□ -1.54
PRPF3O43395 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF3O43395 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF3O43395 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PRPF3O43395 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF3O43395 DDX18P3-201ENST00000404856 2007 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PRPF3O43395 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF3O43395 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF3O43395 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PRPF3O43395 OR56B2P-201ENST00000317102 954 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 AL590240.1-201ENST00000334118 313 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.4□□□□□ -1.54
PRPF3O43395 RNU2-42P-201ENST00000410697 113 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 EIF4A1P3-201ENST00000411521 244 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 ATG4AP1-201ENST00000416893 538 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 FABP7P2-201ENST00000429946 379 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF3O43395 MTCYBP34-201ENST00000439552 670 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 RPS26P2-201ENST00000440331 348 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF3O43395 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF3O43395 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF3O43395 ATG12P2-201ENST00000456830 416 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF3O43395 CYCSP34-201ENST00000458172 304 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 AL591473.1-201ENST00000464297 313 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 AP000563.1-201ENST00000490865 758 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 RPL36AP41-201ENST00000493820 306 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF3O43395 AC118465.1-201ENST00000513820 1271 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 SNORA48.10-201ENST00000516965 160 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF3O43395 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF3O43395 AC107918.3-201ENST00000533272 382 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
PRPF3O43395 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF3O43395 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF3O43395 AC079075.1-201ENST00000559543 878 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 SULT1C2P1-202ENST00000562418 459 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF3O43395 AC015912.2-201ENST00000571053 181 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms