Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 AC093510.2-201ENST00000562820 896 ntBASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 AC022884.3-201ENST00000579571 248 ntBASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 ABI1P1-201ENST00000603375 1120 ntBASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 AL451086.1-201ENST00000605596 223 ntBASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 uc_338.9-201ENST00000617424 182 ntBASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 AC106858.1-201ENST00000637497 429 ntBASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 AC017007.4-201ENST00000503353 1352 ntBASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.13□□□□□ -1.75
NEDD8-MDP1E9PL57 CYP1D1P-201ENST00000416662 1433 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL592494.2-201ENST00000425455 1548 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 MIR16-2-201ENST00000362117 81 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 RNU6-1176P-201ENST00000390955 107 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC005189.1-201ENST00000431286 310 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 BMS1P19-201ENST00000433925 393 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 SETP6-201ENST00000479329 568 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC025445.1-201ENST00000502728 300 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AP000916.1-201ENST00000533869 835 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 MIR4429-201ENST00000580105 73 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC107982.3-201ENST00000584957 985 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC018618.2-201ENST00000604770 446 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 MIR92B-201ENST00000607575 96 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC092953.2-201ENST00000608000 699 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC016957.2-201ENST00000616998 848 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC006133.1-201ENST00000617106 264 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 RMST_9.1-201ENST00000619945 193 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL669942.2-201ENST00000620352 697 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL354798.1-201ENST00000622505 329 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AL356121.2-201ENST00000624715 780 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 AC092079.1-201ENST00000558620 1985 ntBASIC4.12□□□□□ -1.75
NEDD8-MDP1E9PL57 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 ATP5F1P3-201ENST00000397213 657 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 ATF1P1-201ENST00000406040 927 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 RNU6ATAC-201ENST00000408749 126 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 GSTM3P2-201ENST00000412746 530 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AL445183.3-201ENST00000414168 502 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AL445584.1-201ENST00000431451 330 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC007389.2-201ENST00000434630 306 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC069285.2-201ENST00000440210 275 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 RRM2P4-201ENST00000441721 562 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC097499.1-201ENST00000444277 208 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC243772.1-201ENST00000451620 410 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC005229.2-201ENST00000456995 399 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 MTND2P39-201ENST00000457230 764 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 OR9M1P-201ENST00000459641 921 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 APOOP2-201ENST00000461561 539 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AL139099.1-201ENST00000497398 403 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 OR5H3P-201ENST00000502817 919 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 MTND3P3-201ENST00000505004 126 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 RNA5SP179-201ENST00000517284 121 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC091516.1-201ENST00000549191 703 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AL121834.1-201ENST00000572284 509 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC015726.1-201ENST00000602353 681 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC079610.2-201ENST00000604818 690 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms