Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC005005.4-201ENST00000623789 16698 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC053481.2-202ENST00000582394 1500 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 INTS6P1-201ENST00000504674 2530 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 OR10J6P-201ENST00000289731 930 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 OR5H2-201ENST00000355273 945 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 RPL23AP29-201ENST00000397284 453 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 MIR1250-201ENST00000408098 113 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 RNU4-72P-201ENST00000410754 173 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AL365203.2-201ENST00000423444 196 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AL591503.2-201ENST00000442314 1005 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 RPL7AP61-201ENST00000443410 636 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AL606662.1-201ENST00000445763 553 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 RPL35AP28-201ENST00000459730 331 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC104685.1-201ENST00000502445 371 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 MTCYBP17-201ENST00000503579 789 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 RPF2P2-201ENST00000504693 896 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 COX6B1P5-201ENST00000509843 249 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 XKRY-201ENST00000510392 1100 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 OR5BC1P-201ENST00000529327 739 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC105254.2-201ENST00000603636 436 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC119501.1-201ENST00000603646 475 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC105429.2-201ENST00000610567 517 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC022079.1-201ENST00000621546 602 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AP000648.2-201ENST00000624182 404 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 GDI2P1-201ENST00000429312 1336 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AP000526.1-201ENST00000603308 1388 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 AC008079.2-201ENST00000623543 20396 ntBASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A3BPQ9Y5P4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 HSPA8P14-201ENST00000552265 1805 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AC063976.2-201ENST00000425667 3556 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 RNU6-1200P-201ENST00000384162 107 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SNORA51.8-201ENST00000384234 132 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SNORD116-8-201ENST00000384365 95 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SNORA70E-201ENST00000384492 135 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SNORA66-201ENST00000384792 133 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 MTCYBP38-201ENST00000417160 1123 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AL035407.1-201ENST00000429211 571 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 DDX39BP2-208ENST00000453923 258 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 RPS15AP17-201ENST00000470598 390 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 COX6B1P2-201ENST00000489624 230 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 RN7SL244P-201ENST00000493405 297 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AC108078.3-201ENST00000502633 489 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SNORA70.11-201ENST00000515987 138 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SNORA70.13-201ENST00000516116 138 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AP006245.2-201ENST00000522004 300 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms