Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA1Q9Y5H4 AC012020.1-201ENST00000624541 1728 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC008033.1-201ENST00000216407 1162 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 GCNT6-201ENST00000379591 934 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 MIR554-201ENST00000384874 96 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 PRRC2CP1-201ENST00000404428 159 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 PRELID3BP11-201ENST00000414230 479 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 NUP35P2-201ENST00000416748 943 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 RPL21P110-201ENST00000433345 446 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC079804.1-201ENST00000461922 436 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AP000926.1-201ENST00000479573 241 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC126121.1-201ENST00000482313 553 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC020890.1-201ENST00000491837 504 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC090071.1-201ENST00000507713 644 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 VWA8P1-201ENST00000510889 176 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC018797.3-201ENST00000513388 1241 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC124293.1-201ENST00000530034 493 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC139103.1-201ENST00000534696 1030 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 CYCSP40-201ENST00000575927 294 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 MIR4286-201ENST00000580651 93 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 MIR3158-1-201ENST00000583596 81 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 DNAJC19P3-201ENST00000594491 331 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 LLPHP1-201ENST00000603571 367 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC079587.1-201ENST00000603846 277 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 SNORD91B-202ENST00000608459 222 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AL133445.2-201ENST00000611191 527 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC093875.1-201ENST00000623688 504 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AC106858.1-201ENST00000637497 429 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 AL359922.3-201ENST00000624779 1670 ntBASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA1Q9Y5H4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 MIR331-201ENST00000362302 94 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 RNU6-354P-201ENST00000383862 107 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 RNU6-610P-201ENST00000384264 107 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 MIR124-3-201ENST00000384866 87 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 ATP5F1P3-201ENST00000397213 657 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AL035405.1-201ENST00000400795 710 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AC006946.1-201ENST00000429106 328 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 FTH1P6-201ENST00000430768 320 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 TDGF1P1-201ENST00000445734 527 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 PPIAP3-201ENST00000450588 505 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 RPL5P32-201ENST00000454085 879 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AL445433.1-201ENST00000457507 257 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AC146507.1-201ENST00000468335 354 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AC012170.1-201ENST00000495139 359 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 RPS27AP13-201ENST00000498403 237 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 AC008958.1-201ENST00000511047 682 ntBASIC4.28□□□□□ -1.72
PCDHGA1Q9Y5H4 MTND4LP31-201ENST00000514859 294 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms