Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
PCDHB1Q9Y5F3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
PCDHB1Q9Y5F3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC012618.3-205ENST00000637896 1496 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 SAMMSON-213ENST00000641336 1521 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AL672167.1-206ENST00000356293 943 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AL390316.1-201ENST00000406279 553 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 Y_RNA.599-201ENST00000410489 109 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 RNU2-50P-201ENST00000410494 143 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC073264.1-201ENST00000411508 416 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AL353706.1-201ENST00000436728 494 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 CYCSP24-201ENST00000445119 316 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 TPT1P13-201ENST00000449760 499 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 RPL36AP33-201ENST00000450395 310 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 RPL26P28-201ENST00000451325 435 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC092647.2-201ENST00000452998 253 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC092324.1-201ENST00000468671 324 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 RN7SL738P-201ENST00000470264 297 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC108078.3-201ENST00000502633 489 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 MYL12BP2-201ENST00000503948 512 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 MTCO2P32-201ENST00000514865 403 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC127024.5-201ENST00000580085 462 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC011447.4-201ENST00000587562 111 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC008759.1-201ENST00000589783 983 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC020914.6-201ENST00000594327 272 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC092354.1-201ENST00000606057 376 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 RNU6-88P-201ENST00000606801 100 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC116447.1-201ENST00000613153 453 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 XPOTP1-201ENST00000443317 2398 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 SCARNA15-201ENST00000607520 4325 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 AC010266.2-201ENST00000564741 3255 ntBASIC5.14□□□□□ -1.59
PCDHB1Q9Y5F3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 INTS6P1-201ENST00000504674 2530 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 Y_RNA.302-201ENST00000364997 102 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 Y_RNA.553-201ENST00000384670 102 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 MIR1182-201ENST00000408363 97 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 TPMTP3-201ENST00000411928 735 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 MTCO3P41-201ENST00000414801 328 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 DLGAP5P1-201ENST00000430307 464 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AL138878.2-201ENST00000440581 1241 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC090071.1-201ENST00000507713 644 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC091965.2-201ENST00000512324 613 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 RNU6-583P-201ENST00000516012 92 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 RNY4P37-201ENST00000516225 96 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AP000873.5-201ENST00000533906 236 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms