Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 RNA5SP502-201ENST00000362694 119 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 RNA5SP366-201ENST00000365454 123 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 MIR1179-201ENST00000408703 91 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 RPL23AP26-201ENST00000412728 464 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC114814.2-201ENST00000419195 485 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AL512637.2-201ENST00000431287 1256 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC009963.2-201ENST00000453431 138 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 RPL23AP2-201ENST00000471227 466 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 NAMPTP2-201ENST00000505629 1115 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 KCTD9P2-201ENST00000512203 1013 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC112206.4-201ENST00000515142 405 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 HMGB1P23-201ENST00000518743 568 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 TVP23BP1-201ENST00000557500 617 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC124068.1-201ENST00000563131 678 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 CYP4A43P-201ENST00000568156 121 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC069366.1-201ENST00000583159 838 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AL161729.3-201ENST00000603533 673 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 ARF4P1-201ENST00000605447 541 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC005014.3-201ENST00000605985 190 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC016542.1-201ENST00000608259 493 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC112503.2-201ENST00000609005 552 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 VN1R9P-201ENST00000614184 867 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC018926.3-201ENST00000618841 406 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC092608.3-201ENST00000625017 386 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AL590396.2-201ENST00000636511 1041 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 MTCO1P6-201ENST00000481192 1384 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC015813.6-201ENST00000624409 5808 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 SAGE4P-201ENST00000442271 3381 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AL161909.1-201ENST00000397390 712 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC006994.1-201ENST00000438212 839 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC105402.2-201ENST00000438503 358 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC104306.1-201ENST00000449702 371 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 UQCRHP4-201ENST00000471686 272 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC104629.1-201ENST00000494226 508 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 RPS6P4-201ENST00000494693 758 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 IGBP1P5-201ENST00000507524 1000 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 PARP4P3-201ENST00000510265 317 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 MIR432-201ENST00000606207 94 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AL031666.3-201ENST00000609320 1006 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC064801.1-201ENST00000612025 407 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AL445567.2-201ENST00000618935 498 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC093875.1-201ENST00000623688 504 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms