Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AL356276.2-201ENST00000435919 558 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 MTND2P21-201ENST00000436242 1042 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 SKP1P1-201ENST00000438081 489 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 RNU6-1218P-201ENST00000458990 108 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 S100A11P1-201ENST00000477525 312 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 RNU6-1308P-201ENST00000516817 103 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 CBX3P5-201ENST00000552017 521 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AC110743.1-201ENST00000584870 478 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 PSMA6P4-201ENST00000603247 718 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 AC009318.3-201ENST00000616916 503 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 OR5BE1P-202ENST00000641168 1176 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TRAPPC4Q9Y296 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 RNA5SP130-201ENST00000364431 114 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 MIR320B1-201ENST00000390209 79 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 RAB28P1-201ENST00000411517 641 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 RSL24D1P6-201ENST00000426934 401 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC073069.1-201ENST00000428657 441 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 MTND4LP7-201ENST00000431728 294 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC026726.1-201ENST00000512859 601 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC092747.2-201ENST00000545069 983 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 NOP56P3-201ENST00000549457 385 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC010680.3-201ENST00000604215 520 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AL591034.3-201ENST00000605511 685 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 MIR6867-201ENST00000610636 67 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 MIR6868-201ENST00000611215 58 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AL139089.1-201ENST00000620372 975 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 CFTRP2-201ENST00000634304 199 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AL163152.1-201ENST00000642001 374 ntBASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC4Q9Y296 AL133412.1-201ENST00000380194 2992 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 RN7SKP44-201ENST00000363602 316 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 UBE2V1P15-201ENST00000407776 448 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 RNA5SP317-201ENST00000410176 116 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 RNA5SP311-201ENST00000411290 116 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 OR8G2P-201ENST00000412796 908 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC009237.5-201ENST00000414271 501 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AL159169.1-201ENST00000421119 127 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC002075.2-201ENST00000425207 252 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 HIGD1AP4-201ENST00000430194 280 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 MTCO3P21-201ENST00000430791 643 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AL691517.1-201ENST00000440833 1235 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 OR9N1P-202ENST00000494289 481 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC010627.1-201ENST00000503819 1294 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms