Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC107016.1-201ENST00000550463 337 ntBASIC5□□□□□ -1.61
NPC1L1Q9UHC9 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5□□□□□ -1.61
NPC1L1Q9UHC9 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5□□□□□ -1.61
NPC1L1Q9UHC9 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5□□□□□ -1.61
NPC1L1Q9UHC9 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5□□□□□ -1.61
NPC1L1Q9UHC9 AC100814.1-201ENST00000606963 623 ntBASIC5□□□□□ -1.61
NPC1L1Q9UHC9 AC016911.1-201ENST00000613297 452 ntBASIC5□□□□□ -1.61
NPC1L1Q9UHC9 AL357559.1-201ENST00000622228 274 ntBASIC5□□□□□ -1.61
NPC1L1Q9UHC9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5□□□□□ -1.61
NPC1L1Q9UHC9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 ZNF285B-201ENST00000561698 1767 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 RNU6-618P-201ENST00000363518 112 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 HMGB3P20-201ENST00000417997 600 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 ARL5AP3-201ENST00000439327 386 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 RPL23AP71-201ENST00000470966 469 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AC110768.1-201ENST00000509222 400 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 RNU1-95P-201ENST00000516357 160 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 RNU1-128P-201ENST00000516704 160 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AF186190.1-201ENST00000517470 480 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AL163642.2-201ENST00000604722 1019 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 HMGB1P50-201ENST00000605814 607 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AC012213.4-201ENST00000606457 354 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 AC019176.2-201ENST00000611579 315 ntBASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPC1L1Q9UHC9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 RNU1-89P-201ENST00000384592 164 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AC068533.1-201ENST00000418542 415 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AC114814.2-201ENST00000419195 485 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 RPL7P4-203ENST00000430239 730 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 RPS3AP46-201ENST00000448352 682 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 BUD31P2-201ENST00000449374 300 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 snoU13.24-201ENST00000458998 104 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AC006499.5-201ENST00000505037 514 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 IGLVIV-53-201ENST00000520107 367 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AP006245.1-201ENST00000522549 120 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AC008011.1-201ENST00000545989 227 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AC079791.1-201ENST00000605356 973 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AC005972.3-201ENST00000606304 481 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AL391497.1-201ENST00000608671 547 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AL732618.1-201ENST00000623251 301 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AP003499.2-201ENST00000624100 483 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.98□□□□□ -1.61
NPC1L1Q9UHC9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 AC233289.1-201ENST00000403700 508 ntBASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 AC245054.1-201ENST00000420944 258 ntBASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 MTND4LP13-201ENST00000425022 298 ntBASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 RPS3AP12-201ENST00000443616 753 ntBASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 SCARNA13-201ENST00000516672 275 ntBASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 AP000889.1-201ENST00000530968 660 ntBASIC4.97□□□□□ -1.61
NPC1L1Q9UHC9 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms