Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AC091516.1-201ENST00000549191 703 ntBASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 AC087888.1-201ENST00000550884 1254 ntBASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 AL136520.1-202ENST00000555494 763 ntBASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 AC012417.1-201ENST00000582307 1039 ntBASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 AC005242.1-201ENST00000585658 438 ntBASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 AC106730.3-201ENST00000624568 641 ntBASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 MARK2P15-201ENST00000432204 2186 ntBASIC3.95□□□□□ -1.78
APOBEC3BQ9UH17 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AL512283.1-201ENST00000606756 1384 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 MIR448-201ENST00000362131 111 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 RNU1-108P-201ENST00000362556 161 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 PTMAP2-201ENST00000397627 327 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AL590704.1-201ENST00000402856 794 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 BTF3P9-201ENST00000418784 283 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 RPL7P53-201ENST00000421245 739 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 EIF4EP1-201ENST00000422311 642 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 MORF4L1P7-201ENST00000426038 703 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 DYNLL1P7-201ENST00000429273 258 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 NDUFA5P10-201ENST00000432147 357 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AL035246.1-201ENST00000433554 1255 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AC074367.1-201ENST00000438685 1125 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AL513321.1-201ENST00000441175 761 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 MTND2P6-201ENST00000455337 1030 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AC008628.1-201ENST00000508663 265 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AC068790.5-201ENST00000602741 355 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AL713922.2-201ENST00000619384 716 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 AC020978.9-201ENST00000624380 1141 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 OR8B1P-202ENST00000641132 1178 ntBASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
APOBEC3BQ9UH17 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AC007685.1-201ENST00000329806 452 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 RNU6-213P-201ENST00000384051 104 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 MIR670-201ENST00000390142 98 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 ARL2BPP3-201ENST00000421226 480 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AC018644.1-201ENST00000429934 551 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 CALM1P2-201ENST00000452941 448 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 OR9M1P-201ENST00000459641 921 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AC091153.1-201ENST00000466297 402 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AP003049.1-201ENST00000529418 457 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AC135178.6-201ENST00000605314 398 ntBASIC3.93□□□□□ -1.78
APOBEC3BQ9UH17 AC004775.1-201ENST00000607389 753 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms