Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 MAPK10-338ENST00000641647 3362 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 MIR133B-201ENST00000362210 119 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 RNU5E-5P-201ENST00000365379 116 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 SNORA16A-201ENST00000384342 137 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 RNU6-178P-201ENST00000384631 104 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 RPL17P50-201ENST00000396131 546 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 RPL6P29-201ENST00000414863 865 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 Z97055.1-201ENST00000419730 712 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AC079355.1-201ENST00000421770 223 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 HMGN2P27-201ENST00000427352 270 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 CYCSP12-201ENST00000437729 300 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 ACTR3P2-201ENST00000439585 1257 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 MTND4P25-201ENST00000441039 533 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 NANOGNBP1-201ENST00000448444 480 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AL033528.1-201ENST00000453780 140 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AC091564.1-201ENST00000464563 479 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 SIAH1P1-201ENST00000479411 923 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 RN7SL447P-201ENST00000494711 245 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 FCF1P3-201ENST00000496394 590 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 ATP5LP3-201ENST00000514223 304 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 BX510359.5-201ENST00000515651 304 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AL671862.1-201ENST00000515851 349 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 RNA5SP230-201ENST00000517039 122 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AP005205.1-201ENST00000563503 508 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 MIR3176-201ENST00000582210 90 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 TAS2R6P-201ENST00000605022 826 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AC091834.1-201ENST00000614543 472 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 OR5H6-203ENST00000642105 978 ntBASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PPARGC1AQ9UBK2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
PPARGC1AQ9UBK2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.59□□□□□ -1.52
PPARGC1AQ9UBK2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.59□□□□□ -1.52
PPARGC1AQ9UBK2 AP000756.2-201ENST00000624168 2567 ntBASIC5.59□□□□□ -1.52
PPARGC1AQ9UBK2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
PPARGC1AQ9UBK2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AC100757.1-201ENST00000616872 1835 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 DCAF13P1-201ENST00000495256 1330 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 RNA5SP183-201ENST00000362452 119 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AC025750.1-201ENST00000399891 379 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 RPS3AP23-201ENST00000401762 784 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 PPIAP9-201ENST00000403866 498 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 RNU6-248P-201ENST00000410720 107 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 OFD1P18Y-201ENST00000420889 959 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AL590609.2-201ENST00000421430 368 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 DPPA2P1-201ENST00000428060 556 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 GSTM5P1-201ENST00000434751 660 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 WASF1P1-201ENST00000447560 1131 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AL133445.1-201ENST00000467051 452 ntBASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.58□□□□□ -1.52
PPARGC1AQ9UBK2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms