Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RPL37P3-201ENST00000456825 293 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 NF1P3-201ENST00000457709 450 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP269-201ENST00000459032 137 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RN7SL51P-201ENST00000468230 285 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC112206.1-201ENST00000468416 477 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RPL7P6-201ENST00000480903 738 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RPS4XP15-201ENST00000489210 795 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC113430.1-201ENST00000506872 718 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC010460.1-201ENST00000507087 466 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 HMGB1P28-201ENST00000507778 552 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP373-201ENST00000517271 95 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC008802.1-201ENST00000519121 791 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AP000859.1-201ENST00000525536 307 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC020914.6-201ENST00000594327 272 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC083899.3-201ENST00000603413 594 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AL512329.2-201ENST00000607350 548 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 Mico1.1-201ENST00000611698 204 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 Z99129.1-201ENST00000612510 255 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC243756.2-201ENST00000618406 463 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 LINC01739-205ENST00000641890 573 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 SMG1P4-204ENST00000523028 4131 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC093591.2-201ENST00000565254 3843 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 OR5BR1P-201ENST00000524992 1330 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC126323.6-202ENST00000568092 3511 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 RPL21P132-201ENST00000331267 462 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP88-201ENST00000365560 109 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 RNU1-74P-201ENST00000384108 171 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 RNU6-1151P-201ENST00000384684 107 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC009804.1-201ENST00000400949 179 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AL589647.1-201ENST00000402485 466 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AL035079.1-201ENST00000405210 287 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 NCSTNP1-201ENST00000406229 144 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AL512430.2-201ENST00000406786 339 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 RPL23AP27-201ENST00000415161 451 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 LINC00993-201ENST00000420453 540 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC062016.2-201ENST00000420950 676 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC009238.2-201ENST00000431026 355 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AL161722.2-201ENST00000434731 981 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 LARP1BP3-201ENST00000437229 869 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 RPL12P3-201ENST00000440080 396 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 CEACAMP7-201ENST00000444105 496 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC011825.1-201ENST00000484967 388 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 RNY4P37-201ENST00000516225 96 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AL139174.1-201ENST00000531489 886 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 PCNPP1-201ENST00000552501 511 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC245505.1-201ENST00000556398 224 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC024940.4-201ENST00000605507 246 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC116165.2-201ENST00000616705 206 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC068870.2-201ENST00000620635 389 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 OR55B1P-203ENST00000641518 2602 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 PABPC1P6-201ENST00000445594 1829 ntBASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 227.2 ms