Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 C2orf27A-204ENST00000623058 969 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 BX005019.1-201ENST00000561881 1810 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM4Q9C037 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM4Q9C037 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM4Q9C037 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM4Q9C037 RNA5SP119-201ENST00000362715 117 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM4Q9C037 AC104297.1-201ENST00000393779 870 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 RN7SKP235-201ENST00000410662 305 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM4Q9C037 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 USP9YP31-201ENST00000431405 881 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 AL157884.3-201ENST00000448273 1184 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 RPL7P31-201ENST00000450192 724 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 MTCO3P20-201ENST00000454926 688 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 RPL23AP81-201ENST00000455252 467 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 ACTR3P3-201ENST00000480448 893 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM4Q9C037 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 RPL21P12-201ENST00000559810 515 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 AC025175.1-201ENST00000606482 759 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 RIOK3P1-201ENST00000418778 1528 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 AC006504.1-201ENST00000562493 3666 ntBASIC3.98□□□□□ -1.77
TRIM4Q9C037 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM4Q9C037 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM4Q9C037 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM4Q9C037 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM4Q9C037 MFSD8-236ENST00000641509 4050 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM4Q9C037 CUL4AP1-201ENST00000514750 1863 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 MIR218-2-201ENST00000385006 110 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 PTMAP5-201ENST00000393073 333 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 AC069218.2-201ENST00000411665 344 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 TCEA1P4-201ENST00000415066 844 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 OR4K6P-201ENST00000416478 897 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 AIMP1P1-201ENST00000418670 937 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 HSFY1P1-201ENST00000423928 1178 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 COX6B1P7-201ENST00000430845 235 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 BTF3P10-201ENST00000433415 495 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 AL512326.1-201ENST00000443050 721 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 RPL23AP62-201ENST00000463396 453 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 AC010374.1-201ENST00000503762 1237 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 HPRT1P2-201ENST00000505250 544 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 RNA5SP49-201ENST00000516450 115 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM4Q9C037 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 AL592295.2-201ENST00000612578 206 ntBASIC3.97□□□□□ -1.77
TRIM4Q9C037 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRIM4Q9C037 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM4Q9C037 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRIM4Q9C037 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRIM4Q9C037 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM4Q9C037 RNU1-14P-201ENST00000362759 152 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 RNA5SP36-201ENST00000410197 133 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 RN7SKP33-201ENST00000410942 340 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 RAB9AP3-201ENST00000412737 573 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 BOLA3P4-201ENST00000418151 400 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 EIF1P3-201ENST00000423841 334 ntBASIC3.96□□□□□ -1.78
TRIM4Q9C037 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM4Q9C037 RAB9AP1-201ENST00000449393 573 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms