Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 AC095050.2-201ENST00000510748 1458 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 Z73965.1-201ENST00000623412 2297 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 CR381670.1-201ENST00000624291 1693 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 RNU6-1331P-201ENST00000363658 106 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC114814.2-201ENST00000419195 485 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AL157884.3-201ENST00000448273 1184 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC104978.1-201ENST00000449387 391 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 CYCSP53-201ENST00000455540 265 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 OR9M1P-201ENST00000459641 921 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 S100A11P1-201ENST00000477525 312 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC108941.1-201ENST00000502853 530 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC110768.1-201ENST00000509222 400 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 MIR2114-201ENST00000516645 80 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC008802.1-201ENST00000519121 791 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AL133247.2-201ENST00000603236 482 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 AC004241.3-201ENST00000611728 517 ntBASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UPF3BQ9BZI7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC009229.4-201ENST00000623854 1947 ntBASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC093719.1-202ENST00000392735 373 ntBASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 NDUFB4P4-201ENST00000404822 243 ntBASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 RPL7P28-201ENST00000437739 740 ntBASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC037198.2-201ENST00000478845 733 ntBASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 ACTR3P3-201ENST00000480448 893 ntBASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC106872.2-201ENST00000494303 480 ntBASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC006499.5-201ENST00000505037 514 ntBASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 RN7SKP83-201ENST00000516512 178 ntBASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.47□□□□□ -1.69
UPF3BQ9BZI7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
UPF3BQ9BZI7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.69
UPF3BQ9BZI7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.46□□□□□ -1.69
UPF3BQ9BZI7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
UPF3BQ9BZI7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 RNA5SP72-201ENST00000364442 117 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 RAB9AP3-201ENST00000412737 573 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 HIGD1AP12-201ENST00000427832 281 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 MOB1AP1-201ENST00000430903 535 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 SKP1P1-201ENST00000438081 489 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 RAB9AP1-201ENST00000449393 573 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 EIF4A1P11-201ENST00000451239 222 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 DNAJC19P1-201ENST00000455312 319 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 AC092045.1-201ENST00000495716 1231 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 MIR3200-201ENST00000580767 85 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 AL354760.1-201ENST00000608357 643 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 OR6C71P-202ENST00000641886 1107 ntBASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPF3BQ9BZI7 AC233968.1-201ENST00000611212 1300 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms