Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC097262.1-201ENST00000452559 548 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 ANKRD26P4-201ENST00000455755 950 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC008694.2-201ENST00000517591 306 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC018442.3-201ENST00000523025 183 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 DEFB130C-202ENST00000530001 230 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 PDCL2P2-201ENST00000533651 189 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 MIR4675-201ENST00000577898 77 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 MIR4715-201ENST00000584117 79 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 RN7SL622P-201ENST00000585292 275 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC068790.4-201ENST00000602474 263 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AP003465.2-201ENST00000602571 373 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 NTAN1P1-201ENST00000603150 646 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 MTND3P19-201ENST00000603825 345 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 SUMO2P14-201ENST00000604488 293 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC024257.5-201ENST00000612739 531 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 RMST_5.1-201ENST00000618704 126 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC015722.2-201ENST00000622210 551 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 OR5BE1P-202ENST00000641168 1176 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 OR5P1P-201ENST00000299512 925 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 RNA5SP146-201ENST00000410743 123 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 MIR1911-201ENST00000410783 80 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 RPL26P29-201ENST00000415623 438 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 BMI1P1-201ENST00000445879 941 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 ARL2BPP10-201ENST00000446487 531 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 HPRT1P2-201ENST00000505250 544 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AC116353.3-201ENST00000511215 249 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 RNA5SP497-201ENST00000516081 97 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 MTCO1P49-201ENST00000523429 802 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AC011611.5-201ENST00000552477 578 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AC087465.1-201ENST00000560574 245 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AP000811.1-201ENST00000603803 651 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 DUXAP11-201ENST00000603858 526 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AL121890.2-201ENST00000617644 465 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AL031667.3-201ENST00000620124 655 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 FP325313.1-201ENST00000638228 703 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AC093849.1-201ENST00000563631 2209 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SALL3Q9BXA9 AL390237.1-201ENST00000404226 1415 ntBASIC5.36□□□□□ -1.55
SALL3Q9BXA9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 MTND5P29-201ENST00000458676 1807 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC104297.1-201ENST00000393779 870 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 ERHP2-201ENST00000402323 299 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 HDGFP1-201ENST00000405943 252 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AL590084.1-201ENST00000407885 387 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 RPS20P14-201ENST00000412545 360 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC019178.2-201ENST00000423595 505 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 GTF2IP2-201ENST00000424290 697 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AL732292.1-201ENST00000426692 226 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 RPL23AP25-201ENST00000430973 463 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 MTCO2P16-201ENST00000436962 677 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 RN7SL691P-201ENST00000494487 301 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC104164.2-201ENST00000496953 495 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AK3P4-201ENST00000504283 583 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC008565.1-201ENST00000509046 885 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 NDUFB4P12-201ENST00000513465 390 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms